Diospyros lotus (date-plum): 127808109
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Entry
127808109 CDS
T10632
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
127808109
Enzymes [BR:
dlt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
127808109
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
127808109
NCBI-ProteinID:
XP_052202443
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Position
8:complement(29743290..29751456)
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AA seq
673 aa
AA seq
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MLRNPLIEVFSSRLLFLLILSSVLVPGIVGRVLNLGVSAPAVQLHVEDNRVEMQNGILQL
TLSNPGGVVLGIKYGGIDNLLELRNEVWNGGFWDLDWIETGNQGKRGEFDSLEGTSMKVI
LQTEEQLELSFTRIWDPSMQGKQAPLNIDKRFIVLRGCSGFYSYAIFEHLEDMPAFNLSI
TRLAFMLNKDKFHYMAIANNRQRHMPHPDDRLPGRCQELAYPEAVRLINPLEPEFENEVD
DKYQYSCENKDNRVHGWISFEPPVGFWQITPSNEFRTGGPFKQDLTSHVNPTTLAIFVTS
HYAGTDLVVKFQAAEIWKKVFGPVFIYLNSVSDGNNPLLLWDDAIEQMKIETKTWPYNFP
ESEDFPRYSQRGKITGRLLVQDRYVSKEFIPANGGYVGLAPPGDAGSWQRESKGYQFWTT
AAEGGYFTIENIRAGNYNLYASVPGFIGDYRYDDTITITAGCLIDMGNIVYEPPRNGPTL
WEIGVPDRSAAEFYIPDPNPIYVNKLCVNHSDRFRQYGLWERYADLYPDEDLTYRIGVSD
YRKDWFFVQVTRKIGEKKYKGTTWQIKFKLENINRTGTYKLKLALASAHYSELQVRVNDA
EADPLFSSGVIGSDNAIARHGIHGLYWWFDIGINGTQFIQGDNTIYLTQPKNSSPFQGIM
YDYIRLEGSPASS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaatccattgattgaagttttctcgtctcgtcttctctttctacttatactt
tctagtgtcttagtgccggggatcgtaggtagggtactaaatctgggagtttctgctcca
gccgtgcagctgcatgttgaggataatcgtgtggagatgcagaatggcatactgcaactc
acactatcaaatcctgggggagttgtcttgggaatcaaatatggcggaattgacaacctg
cttgaactgcgtaatgaagtatggaatggagggttctgggatcttgattggatcgaaaca
ggaaatcaaggaaaaagaggagagtttgactcgcttgaaggaacaagcatgaaggtcata
ttgcaaactgaggaacagttggagctttcattcacaaggatatgggatccctcgatgcag
ggaaagcaagccccattaaatatagacaaaaggtttatagtgctacgtggttgctcagga
ttttactcatatgccatttttgaacacttggaggacatgcctgctttcaatcttagtatt
accagacttgctttcatgctcaacaaagacaagtttcattacatggccatagcaaataac
aggcagaggcacatgccccatccagatgaccggttaccaggaagatgccaagaattggcc
taccctgaagcagtccgacttatcaatcccttggagccagaatttgaaaatgaagtggat
gacaagtaccaatactcatgcgagaacaaggataaccgggtacacgggtggatatccttt
gaaccgcctgtggggttctggcaaatcactcccagcaatgagttccgcactggtggaccc
ttcaaacaagacctaacctcccatgtcaacccaactacccttgctatatttgtcacttct
cattatgcgggaacagatcttgtagtaaaatttcaagctgctgagatttggaaaaaagtt
tttgggccagtttttatctatcttaattctgtatcggatggaaataatccacttttgctt
tgggatgatgcaattgaacagatgaaaattgaaaccaaaacctggccctataatttccct
gaatctgaagattttccacgttatagtcagagggggaaaattactggtagattactggtc
caggacaggtacgtaagtaaggaatttataccagcaaatggtgggtatgttggattagcc
ccaccaggagatgctggatcatggcaaagagaatccaaagggtaccaattctggaccaca
gcagctgaaggtggttattttactattgagaatatacgtgcaggaaactataatctttat
gcatcagttcctggtttcattggagattaccgatatgatgatacaattactataactgca
ggctgtttaattgatatgggtaatattgtgtacgagcctccaagaaatggtcccacactc
tgggaaattggggttcctgatcgttcagctgcagaattctacatcccagatcctaatcca
atatatgtaaacaaactgtgtgtaaatcattctgacaggtttaggcaatatggattgtgg
gaaaggtatgcggatttatatcctgatgaagatttaacataccggattggtgttagcgac
tacagaaaagattggttctttgttcaagtaaccagaaaaataggtgagaagaaatacaaa
ggaactacatggcaaatcaagtttaaactggagaacatcaatcggactggaacctacaaa
ctcaaactggcacttgcatcagcacattattctgagctgcaggttcgggttaatgatgca
gaagcagaccctttattttcaagtggagtaattgggagcgataatgcaattgcgaggcat
ggcattcatgggctctactggtggttcgacataggtataaatggtactcaattcattcaa
ggggataataccatttacctaacacaaccaaagaactccagccctttccaggggattatg
tatgattatattcgtttggaaggttccccagcttcttcctag
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