KEGG   Diospyros lotus (date-plum): 127809442
Entry
127809442         CDS       T10632                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03010  Ribosome
dlt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    127809442
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127809442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dlt03011]
    127809442
   04121 Ubiquitin system [BR:dlt04121]
    127809442
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dlt04147]
    127809442
Ribosome [BR:dlt03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    127809442
  Archaea
    127809442
Ubiquitin system [BR:dlt04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127809442
Exosome [BR:dlt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127809442
  Exosomal proteins of colorectal cancer cells
   127809442
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 127809442
NCBI-ProteinID: XP_052204189
LinkDB
Position
9:25925201..25925932
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagaccataaccctagaggtcgaatcctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcatccctccggaccag
cagcggctcatcttcgctggaaaacagctggaggacggcagaaccctagccgactacaac
attcagaaggagtccaccctacacctggtcctccgcctccgcggcggcgccaagaaacgc
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctt
gccgtcttgcagttctacaaggtggatgactccggcaaggtccagaggctcaggaaggag
tgtcccaatgccgagtgcggtgccggaaccttcatggccaatcacttcgaccgccactac
tgtggcaagtgtggcctcacctatgtctaccagaaggccggcggtgactga

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