Diospyros lotus (date-plum): 127809505
Help
Entry
127809505 CDS
T10632
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127809505
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127809505
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127809505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-ANAPC11
zf-C3HC4_3
RINGv
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
127809505
NCBI-ProteinID:
XP_052204297
LinkDB
All DBs
Position
9:complement(15634852..15635476)
Genome browser
AA seq
133 aa
AA seq
DB search
MGLSNFPSPAEGVLTVLVNTVNTMALLKNMVRSVLQIVGAAAGSGASSNVEEPTAEADSW
RRERRVSITRFGSLCGGGIERVWPAMECSVCLCRFEEEEEVGELACKHYFHKGCLEKWFD
NHYRTCPLCRSIS
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcgaatttcccgagtccggcggaaggggtgctgacggtgctggtgaacacg
gtgaacacaatggctctgttgaagaacatggtgaggtccgtgcttcagattgtcggagcc
gccgccgggagtggggcatcttcgaatgtggaggagccgacggcggaggcggatagttgg
agaagagaaaggagagtgtcgattacaaggttcggatccttgtgcggcggtggcattgag
agagtgtggccggcaatggagtgctctgtttgcctgtgcaggtttgaggaagaagaggag
gttggcgagttggcttgcaagcattacttccacaagggttgtttagaaaagtggtttgat
aaccactacagaacttgccctctttgtcgctcaatctcgtga
DBGET
integrated database retrieval system
