Diospyros lotus (date-plum): 127809563
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Entry
127809563 CDS
T10632
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127809563
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127809563
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127809563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_16
zf-C3H2C3
zf-Nse
zinc_ribbon_16
zf-RING_Vps41
Prok-RING_1
Prok-RING_4
VPS18_RING_C
PHD
PHD_NSD
zf-RING_10
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
127809563
NCBI-ProteinID:
XP_052204396
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All DBs
Position
9:3840516..3852495
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AA seq
307 aa
AA seq
DB search
MENSKSDDNGAKPTSNENPNNSATVLVEEQQQEQAGSNDVMVNQARQSTRTPFTNLSQVD
ADLALARTLQEQERAYMMLRMNGDGSDYGSWDAGSYVHEDDEDFDDPSEDEYDVTDAEEE
DEEDEGDYEDEDAFDVHAHAGEDNDSTVGVELDPASFPNDEAYARALQDAEDREMAARLL
ALAGINDREPEDLEDHGGNSQDIWEEVDPDELSYEELLALGEVVGTESRGLSADTIAALP
SVNYKTNSTQDGSNDSCVICRLEYEDGDTLTVLSCKHSYHSECINNWLRINKVCPVCSTE
VSASGNS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcaaaatccgatgataatggagccaaacccacctccaatgaaaaccctaac
aattccgcgactgtgttagttgaagaacaacaacaagaacaggcaggatcgaatgacgtc
atggttaatcaagcgcgtcagtcgacccgaactcccttcaccaacctcagtcaggtcgat
gctgatctcgcccttgcccggaccttgcaagaacaggaaagagcgtatatgatgctgaga
atgaatggtgatgggagtgattatggtagttgggatgctggaagctatgtgcatgaggat
gatgaagattttgatgatcctagtgaagatgaatatgatgttactgatgcagaggaagag
gatgaggaggatgaaggtgactatgaggatgaggatgcgtttgatgtgcatgctcatgct
ggggaggataatgactcaactgttggtgttgaattagatccagcatcttttcctaatgat
gaggcttatgctagagctctacaagatgctgaagatcgagaaatggcagctaggctgttg
gccttagctgggataaatgatcgggaacctgaggatttggaggatcatggtggtaactcc
caggatatatgggaggaggtagacccagatgagctatcgtatgaggagctgcttgcatta
ggtgaggtagttggaactgagagtcgagggctctctgctgatacaattgccgctttgcct
tcagtgaattataagacaaatagcactcaggatggaagtaatgactcttgtgttatctgc
cggttggagtacgaagatggtgacaccttgactgtactttcttgtaaacactcttaccat
tctgagtgcataaacaactggttacgaataaacaaggtctgcccagtttgcagcactgag
gtctccgcatctggaaacagctag
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