KEGG   Diospyros lotus (date-plum): 127809659
Entry
127809659         CDS       T10632                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127809659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dlt03041]
    127809659
Spliceosome [BR:dlt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    127809659
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 127809659
NCBI-ProteinID: XP_052204596
LinkDB
Position
9:29620997..29665698
AA seq 946 aa
MDSKSGQKARAEHERDRDSTDEYKDSSRDREHKHRSSKQKSKNGADEDRRRHHHHHDSGE
KHRSKHEKHRHRGGDDHRKSREYSEDRERSVEPRSQREGSRERVHGHGEKRERSHEPRTD
REGSRERCRDHRDKREKSNEREGSRDRFLREDSVERRHYKRKDRGECEDLFEGSEKRARF
SNEVKDERKDRKERRQLEDRVVEDGDDKELNGGEKGERRERRRFEDGVKESEANEAKESR
REEKRGRRKFEDRVKKEEMDIDEESKQRAFDEGLLEKEPKDERYDDNSNANATNGDGSTD
KVDALGLANGAFKTLPETSLAPILSPPTKVSSISTANENKGVNITGSHEVTEKSSTDGAA
SAGKSGNLSLDALAKAKRALQMQKELAEKLKKLPLSNKGATLDGTPQVASREVIKAPSSS
SGLLPTPVSTSIFPAAPAASINPAASALAQQAGLTAPNLEAVKRAQELAAKMGFRQDPQF
APLINMFPGQLPPEVTYQPKPAKAPVLRLDALGREIDEHGNVVNTTKVTNLSTLKVNINK
QKKDAFQILKPELDVDPETNPHFDARMGINSKKLLRPKRTNFQFVEEGKWSKEAEIIKLK
SQFGEAQAKELKAKQAQLAKAKAEPDINPNLIEVSQRVITKEKPKEPIPEIEWWDQPLLQ
LAGYGDIIDGNVTEDKLRMEKITIYVEHPRPIEPPAEPVPPPPQPLKLTKKEQKKLRTQR
RLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIKSAAAEREQAHI
DRNIARKLTPDERREKKERKLFDDPNTMETIVSVYKINDLSHPQTRFKVDVNAQENRLAG
CAVISDGMSIVVVEGGSKSIKRYGKLMLRRIDWASAVKNEEEDRDEDEDKPVNKCVLVWQ
GSVAKPSFNRFSVHECRTEAAAHKVFYDAGVGHYWDLAVNFSEGEM
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggatagcaaatccggccaaaaagccagagccgaacacgagagggatagagattcaacc
gatgaatacaaagattcgagtagagatcgagagcacaagcaccgtagcagcaaacagaaa
tccaagaacggcgccgacgaggatcgccgccgccaccatcaccaccacgactctggtgag
aagcaccggtccaagcacgagaagcaccgacaccgcggaggggatgaccatcgcaaatcg
agggagtactctgaggaccgcgagagatcggtcgagccgaggagccagagggaaggtagc
agagaaagggttcacggtcatggcgagaagcgcgagagatcgcacgagccgaggactgac
agagagggtagcagagagaggtgtcgcgatcatcgcgacaagcgcgagaagtctaacgag
agagaaggcagcagagataggtttttgagagaggattctgtggagaggcggcattataag
aggaaagatagaggagagtgtgaggatctgtttgaagggagtgagaagagagctagattt
tccaacgaggtcaaggatgagaggaaggataggaaggaaaggaggcagttggaagatcga
gttgttgaggacggcgatgataaggaattgaacggaggagagaaaggagagcggagagaa
aggaggagattcgaggatggagtaaaggaaagtgaggcaaacgaggctaaggagagtcgt
agagaagagaagagggggaggaggaaatttgaggatcgcgtgaagaaggaagagatggat
atcgatgaggaaagtaaacagagggcttttgacgaaggtcttttggagaaagaacccaaa
gatgagcgatatgatgacaatagtaatgccaatgcaacaaatggggatggttcaactgat
aaagttgatgctttgggtctggcaaatggggcctttaagactctacctgagacatcattg
gcccctatcctttcccctcctaccaaggtatcttcaatttctaccgcaaatgaaaataag
ggagttaatattaccggatctcatgaggttactgaaaaatctagtacagatggggcagct
tcagctggcaaaagtggaaatctttctcttgatgctttagcaaaagccaagagagcttta
caaatgcaaaaggagttggcagagaagttgaagaaacttccattgtcaaataaaggggct
accttagatggtaccccacaagtggcatcaagggaagttatcaaggccccatcatctagt
tctggattacttcctacacctgtgagtacgtctattttccctgctgctcctgcagcttct
atcaatcctgctgcaagtgccctggctcagcaagctggcctcacagctcccaatcttgaa
gctgtaaaacgtgcacaagagcttgctgccaagatgggatttcggcaagatccacagttt
gctcctcttataaacatgttcccaggacagttgccaccagaggttacctaccaacccaag
cctgctaaggcccctgttcttcgtttggatgcactaggtagagaaatagatgagcatgga
aatgtggtgaacaccactaaagtaaccaacctgagcactctgaaggtgaacattaacaaa
caaaagaaagacgcattccaaattcttaaacctgaattggatgtggatccagaaacaaat
cctcattttgatgccagaatgggtattaattcaaaaaagctcttgagacctaagaggact
aattttcagtttgtagaggaaggtaaatggtcgaaagaggcagagatcattaaactgaag
agtcaatttggagaagcacaagccaaagagctaaaggcaaagcaagcgcagctggctaag
gcaaaggcagaacctgatataaatccaaacctaatagaggtatcacagagagttatcacg
aaagaaaagccaaaagaaccaattcctgaaattgagtggtgggatcaacctcttttacaa
ttggctggttatggtgatatcattgatggtaacgtaactgaagataaactgaggatggag
aagatcactatttatgtggagcatccacgtccaattgagccccctgctgaaccagttcct
ccgcctcctcaacccctgaaactaaccaagaaggagcagaagaaactccgtacacaacgg
cgtctggctagggaaaaggataggcaggagatgattagacaaggcctgatagaaccacct
aaaccaaaagttaaaatgagcaatctcatgaaggttcttggctcagaagcaactcaagat
cccacaaggcttgaaatggaaatcaagagtgctgctgctgagcgtgagcaagcgcacatt
gaccggaatattgcacgcaaactgactcctgatgaacgacgtgagaagaaagagaggaag
ctttttgatgatccaaacacaatggagactatagtttcagtatacaagatcaatgacctt
tcacatccacagactcgcttcaaggttgatgttaatgcacaggagaaccggttggctgga
tgtgctgttatttcagatggtatgagcattgtggttgttgaaggtggtagcaagtctatt
aagaggtacggaaagcttatgcttaggcgtatagactgggcttctgccgtgaaaaatgag
gaggaagatagggatgaagacgaggacaaacctgtgaacaagtgtgtgttggtgtggcag
gggagtgttgctaaacccagcttcaataggttttctgtccatgagtgcaggactgaagct
gctgctcataaagtcttttacgatgctggggtcggtcactattgggatctggctgttaac
ttctcagagggtgaaatgtaa

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