Diospyros lotus (date-plum): 127809659
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Entry
127809659 CDS
T10632
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127809659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127809659
Spliceosome [BR:
dlt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127809659
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
127809659
NCBI-ProteinID:
XP_052204596
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Position
9:29620997..29665698
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AA seq
946 aa
AA seq
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MDSKSGQKARAEHERDRDSTDEYKDSSRDREHKHRSSKQKSKNGADEDRRRHHHHHDSGE
KHRSKHEKHRHRGGDDHRKSREYSEDRERSVEPRSQREGSRERVHGHGEKRERSHEPRTD
REGSRERCRDHRDKREKSNEREGSRDRFLREDSVERRHYKRKDRGECEDLFEGSEKRARF
SNEVKDERKDRKERRQLEDRVVEDGDDKELNGGEKGERRERRRFEDGVKESEANEAKESR
REEKRGRRKFEDRVKKEEMDIDEESKQRAFDEGLLEKEPKDERYDDNSNANATNGDGSTD
KVDALGLANGAFKTLPETSLAPILSPPTKVSSISTANENKGVNITGSHEVTEKSSTDGAA
SAGKSGNLSLDALAKAKRALQMQKELAEKLKKLPLSNKGATLDGTPQVASREVIKAPSSS
SGLLPTPVSTSIFPAAPAASINPAASALAQQAGLTAPNLEAVKRAQELAAKMGFRQDPQF
APLINMFPGQLPPEVTYQPKPAKAPVLRLDALGREIDEHGNVVNTTKVTNLSTLKVNINK
QKKDAFQILKPELDVDPETNPHFDARMGINSKKLLRPKRTNFQFVEEGKWSKEAEIIKLK
SQFGEAQAKELKAKQAQLAKAKAEPDINPNLIEVSQRVITKEKPKEPIPEIEWWDQPLLQ
LAGYGDIIDGNVTEDKLRMEKITIYVEHPRPIEPPAEPVPPPPQPLKLTKKEQKKLRTQR
RLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIKSAAAEREQAHI
DRNIARKLTPDERREKKERKLFDDPNTMETIVSVYKINDLSHPQTRFKVDVNAQENRLAG
CAVISDGMSIVVVEGGSKSIKRYGKLMLRRIDWASAVKNEEEDRDEDEDKPVNKCVLVWQ
GSVAKPSFNRFSVHECRTEAAAHKVFYDAGVGHYWDLAVNFSEGEM
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaatccggccaaaaagccagagccgaacacgagagggatagagattcaacc
gatgaatacaaagattcgagtagagatcgagagcacaagcaccgtagcagcaaacagaaa
tccaagaacggcgccgacgaggatcgccgccgccaccatcaccaccacgactctggtgag
aagcaccggtccaagcacgagaagcaccgacaccgcggaggggatgaccatcgcaaatcg
agggagtactctgaggaccgcgagagatcggtcgagccgaggagccagagggaaggtagc
agagaaagggttcacggtcatggcgagaagcgcgagagatcgcacgagccgaggactgac
agagagggtagcagagagaggtgtcgcgatcatcgcgacaagcgcgagaagtctaacgag
agagaaggcagcagagataggtttttgagagaggattctgtggagaggcggcattataag
aggaaagatagaggagagtgtgaggatctgtttgaagggagtgagaagagagctagattt
tccaacgaggtcaaggatgagaggaaggataggaaggaaaggaggcagttggaagatcga
gttgttgaggacggcgatgataaggaattgaacggaggagagaaaggagagcggagagaa
aggaggagattcgaggatggagtaaaggaaagtgaggcaaacgaggctaaggagagtcgt
agagaagagaagagggggaggaggaaatttgaggatcgcgtgaagaaggaagagatggat
atcgatgaggaaagtaaacagagggcttttgacgaaggtcttttggagaaagaacccaaa
gatgagcgatatgatgacaatagtaatgccaatgcaacaaatggggatggttcaactgat
aaagttgatgctttgggtctggcaaatggggcctttaagactctacctgagacatcattg
gcccctatcctttcccctcctaccaaggtatcttcaatttctaccgcaaatgaaaataag
ggagttaatattaccggatctcatgaggttactgaaaaatctagtacagatggggcagct
tcagctggcaaaagtggaaatctttctcttgatgctttagcaaaagccaagagagcttta
caaatgcaaaaggagttggcagagaagttgaagaaacttccattgtcaaataaaggggct
accttagatggtaccccacaagtggcatcaagggaagttatcaaggccccatcatctagt
tctggattacttcctacacctgtgagtacgtctattttccctgctgctcctgcagcttct
atcaatcctgctgcaagtgccctggctcagcaagctggcctcacagctcccaatcttgaa
gctgtaaaacgtgcacaagagcttgctgccaagatgggatttcggcaagatccacagttt
gctcctcttataaacatgttcccaggacagttgccaccagaggttacctaccaacccaag
cctgctaaggcccctgttcttcgtttggatgcactaggtagagaaatagatgagcatgga
aatgtggtgaacaccactaaagtaaccaacctgagcactctgaaggtgaacattaacaaa
caaaagaaagacgcattccaaattcttaaacctgaattggatgtggatccagaaacaaat
cctcattttgatgccagaatgggtattaattcaaaaaagctcttgagacctaagaggact
aattttcagtttgtagaggaaggtaaatggtcgaaagaggcagagatcattaaactgaag
agtcaatttggagaagcacaagccaaagagctaaaggcaaagcaagcgcagctggctaag
gcaaaggcagaacctgatataaatccaaacctaatagaggtatcacagagagttatcacg
aaagaaaagccaaaagaaccaattcctgaaattgagtggtgggatcaacctcttttacaa
ttggctggttatggtgatatcattgatggtaacgtaactgaagataaactgaggatggag
aagatcactatttatgtggagcatccacgtccaattgagccccctgctgaaccagttcct
ccgcctcctcaacccctgaaactaaccaagaaggagcagaagaaactccgtacacaacgg
cgtctggctagggaaaaggataggcaggagatgattagacaaggcctgatagaaccacct
aaaccaaaagttaaaatgagcaatctcatgaaggttcttggctcagaagcaactcaagat
cccacaaggcttgaaatggaaatcaagagtgctgctgctgagcgtgagcaagcgcacatt
gaccggaatattgcacgcaaactgactcctgatgaacgacgtgagaagaaagagaggaag
ctttttgatgatccaaacacaatggagactatagtttcagtatacaagatcaatgacctt
tcacatccacagactcgcttcaaggttgatgttaatgcacaggagaaccggttggctgga
tgtgctgttatttcagatggtatgagcattgtggttgttgaaggtggtagcaagtctatt
aagaggtacggaaagcttatgcttaggcgtatagactgggcttctgccgtgaaaaatgag
gaggaagatagggatgaagacgaggacaaacctgtgaacaagtgtgtgttggtgtggcag
gggagtgttgctaaacccagcttcaataggttttctgtccatgagtgcaggactgaagct
gctgctcataaagtcttttacgatgctggggtcggtcactattgggatctggctgttaac
ttctcagagggtgaaatgtaa
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