Diospyros lotus (date-plum): 127809721
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Entry
127809721 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127809721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127809721
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127809721
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127809721
NCBI-ProteinID:
XP_052204706
LinkDB
All DBs
Position
9:36808739..36822632
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AA seq
258 aa
AA seq
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MSHFGRYGPPDIVDTYSLLVLNISFRTTADDLYPYFDKYGKVVDIFIPKDRRTGDPRGFA
FVRYKYQDEAHMAVERLDGRVIDGREIMVQFAKYGPNAERIHKGRVIERMPHTRGRSRSR
SPRRRSRDDYYRETDYNRRRSRSRSGDGYDRGRHRGRERDYRRRSRSRSASPNYDRGHGS
GRYDDDRHRSRSRSFESASPRRSSLSPLRSLSPRRTPSRDENPTRSKHVERSPTARSISP
KQLDDSRSVSPRNSDIDE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttgggagatacggtcctccggatatcgtagacacctattctttgctcgtc
ctcaacatcagtttccgtacgactgcggatgatctgtacccgtatttcgacaagtatggc
aaggttgtggatatcttcatcccgaaagatcgaaggactggtgatcctcgtggttttgca
tttgttcgctataagtatcaagacgaagcacatatggctgttgaaaggctagatggcagg
gttattgatggcagagaaattatggttcagtttgcaaagtatgggccaaatgcggagcga
attcacaaaggaagggttattgagcgaatgccacatactagaggcagatcgagaagccgc
agcccccggcggaggtccagggatgattattacagagagacagattataacaggaggcgg
agtcgcagcaggagtggggatgggtatgaccgtgggcggcacagagggagggagagagat
taccgccgtcgaagcaggagccgcagtgcaagcccaaactatgatagaggtcatggtagt
gggcgatatgatgatgatcggcacaggagtaggagtcggtcctttgaaagtgcctcccct
cgtcgatccagccttagtccactgagaagtttgtccccccggaggacaccctctagggat
gagaatcctaccagaagcaaacatgttgaacgatctccaactgctcgaagcatttcaccg
aaacaacttgatgattctcgaagcgtttcccctcgtaattcagacattgatgagtga
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