Diospyros lotus (date-plum): 127809898
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Entry
127809898 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127809898
KO
K19022
AP-5 complex subunit beta-1
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127809898
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
127809898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
DUF3429
Motif
Other DBs
NCBI-GeneID:
127809898
NCBI-ProteinID:
XP_052205027
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Position
9:4385897..4394847
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AA seq
1134 aa
AA seq
DB search
MEKPLPLKPLSPQEWEVLIDDVHYGGGRRARWTSSSYAGLPLVELALITILRRDFPQNPK
LHIMVFLEFCLFDFEASPSEFDEVLARLLETLKTLIQSPMDGVSITASLKEQMMVSTSSI
LISLKIDPELSKFSYIAQLQGLTELLLTVVNRPNHGPDRQTRAVACECLRELERAFPCLL
SEIAGLLWGLCHSERTHAAQSYVLLLAGVIHSIVMWKLNISIVNSSAPLVPFNVPQFLMN
ASGLNNKGISDSGYRELRRAMSFLLECPQLLTSCGMVEFMSMVLPVSVVLELQGSLLKVQ
FSGLLYTYDPLLCHAFLMMYMRFFDAFSGQEGEIARRLVFISREAHHYLVFRMLALHWLL
GFVGLLSNGDVGKKKAFLGLTPSFYPLIFDPLALKALKLDLLAYCSNLLSSSIDASPEGV
PSQGAGSGLSMEKLFQNGLVSVSAFKWLPPWSTETAVAFRAFHKFLIGASSHSDIDPSST
RVLMKSTIFRTLQRMLVELTLEFKGLVPVVIAFMDRLFACHKHCWLGEHLLQALDEHLLP
KIKIDYKLSSYFPIFDRIAKNDAIPTTKLLELLIRFMIFLVEKHGPNTGLKSWSQGSKVL
GICQTMLMHHHSSRLFLGLSRLLAFTCLYFPDLEVRDDARIYLRMLVAIPGKKLRHILNS
TDQLPGIAPSHQSSSYFNVQSPQTLHDLKKSQTISSYIHLERVIPLLVKQSWSLSLSILG
IPAHKPAYPEGIKDSEPSVGQREVDGGCNDQTLPEVERIYRPLEPLRVIDSKISEIIEML
RRHFSNVPDYRHMPGLKIRIPCSLRFKSEPFNRVWTVDLPTEGLDGIDVLPAIYAAVLAF
SSSAPYGSIPSNHIPFLLGEPPEKDCSLAPSDSLDMVPIEDDCREDESFKAPVTIELEPR
EPVPGLVNVSFEANTENGQVINGQLQSVAVSIEDMFLRAILPSDISEDARPGYYLDLFNA
LWEACGSSTNTGHEAFPLKGGKGVAAVSGTRSVKLLEVPVTSLILAVEQYLAPFVVGVFG
EPLVNIVKSRGIIWDVIWKDASSDSDLNDAISNTNLDKGPLYLKYKEDEGERKSQVHISR
KNMGQFLILIFLPPMYHLLLQMEVSDVSTLARIRTDHWPSLAYIDDYLEALFFG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcctctgccattgaagccactgtccccccaagaatgggaggttctgatcgac
gacgtccactacggcggcggccgtcgggcgcgctggacgtcctccagctacgccggcctc
ccgctcgtcgagctcgctctgatcacaatcctccgaagggacttccctcaaaaccctaag
cttcacatcatggttttcctcgaattctgcttgttcgacttcgaggcttccccatcggag
ttcgatgaggttctcgctcggctcctcgaaaccctaaaaaccctaattcaatccccaatg
gatggggtttccatcaccgcctctcttaaagagcaaatgatggtctccacatcgtccatt
ctcatttccctgaaaattgatcccgaattgtccaagtttagttacatagcgcagcttcag
ggcttaaccgagttgctgttgacggttgtgaaccggcccaaccacgggccggaccggcaa
actcgagcagtggcgtgcgagtgcctgcgggagcttgagagggctttcccttgcttactt
tctgaaatcgccggtctcttgtggggtttgtgccatagcgagcggactcacgctgcccag
agctatgttttattgctggcaggtgtgattcatagcattgtgatgtggaaactcaatata
tcgatcgttaattcgtcggcccctttggttccattcaatgtgccgcagttcttgatgaat
gctagtggtttgaataacaaggggatttcggattctgggtatagagagcttaggagggcc
atgtctttcttgctggagtgtcctcagttgttgacttcatgcgggatggtggagttcatg
tcaatggttctgccggtgtcggtggtactggagttgcaggggtcgcttttgaaggtgcag
ttctctggtctgctttatacctacgaccctttgctgtgccatgcttttctaatgatgtat
atgcgtttttttgatgcattcagcgggcaagagggtgaaattgcccgtcgccttgtgttt
atctcaagagaagcgcatcattatttggttttccggatgttagcccttcactggttactg
ggttttgttgggttgttatcaaatggagatgtggggaaaaagaaggcttttcttggtttg
actcccagcttttaccccttgatatttgatcctcttgctctgaaagctttgaagcttgac
ttgcttgcttattgctcaaatttgcttagtagttctatagatgcaagtccggaaggtgtt
cctagtcagggtgcaggctcaggattatcaatggagaagctatttcaaaatggtcttgtt
tctgtatcagcattcaaatggttaccaccttggagcactgaaactgcagtagcgtttcga
gcctttcacaagtttttgataggtgcgtcatctcattctgatattgatccttcttcaaca
agagtcctaatgaagtcaaccatcttccgcactttacagagaatgcttgtggagctgaca
ttggagttcaaggggctggttccagttgttattgctttcatggatcgcttgtttgcctgt
cataagcattgctggttgggagagcacttgcttcaggcccttgatgagcatttacttcca
aagatcaagatagattacaagttgtcatcttactttccgatttttgatagaattgccaag
aatgatgcaattccaactactaaactgctagagctgctcatccgcttcatgattttcctt
gttgaaaagcatggcccaaacacgggattgaaatcttggtctcagggaagcaaagttctt
ggaatatgtcagacaatgctgatgcaccaccatagctctagattgttcctgggactatct
cgtcttcttgctttcacttgcctttactttcctgatctggaagttcgtgacgatgcaagg
atctacttgcggatgttggttgcaattccaggaaagaagctcaggcacatactgaacagc
acagaccagctccccgggattgcgccatctcaccagtccagctcatacttcaatgttcag
tctcctcaaaccttgcatgaccttaaaaagtctcagacaatttcttcctacatccacctt
gagcgggtgataccattgcttgtcaagcagtcatggtcattgtctttatcaatcttaggt
attcctgctcacaaacctgcttatccagagggtatcaaggacagtgagccctctgttggg
caaagggaggttgatggaggctgtaatgaccaaactctcccagaagtggaaagaatttat
cgtccactggagccattacgtgtgattgattcaaaaatatcagagattattgaaatgttg
agaaggcatttttccaatgttcctgattatagacacatgccaggcctcaaaattaggatt
ccctgtagtttgagatttaaatctgagccattcaatcgtgtatggacagttgatttgcct
acagaaggtttggatggaatagatgtactccctgccatatatgcagctgtgcttgcattt
tcttcttcggcaccatatgggtctattccttcaaatcacatacctttccttctcggtgaa
cctcctgaaaaagattgttctttagccccaagtgattcgttagacatggttcctatagaa
gatgattgtagagaagacgaaagtttcaaggctcctgtgacaattgaattggaaccgcga
gaacctgtgcctggtctagttaatgtttcctttgaagcaaatacagaaaatggccaagta
atcaatggccagcttcagagtgttgctgttagcattgaagacatgtttcttagggctatt
ctcccgtctgatatatccgaagatgcgagacctggttattatctagacttgttcaatgct
ctatgggaagcatgcggttcttctaccaacactgggcatgaagcctttcccttgaaagga
ggcaaaggagttgccgcagttagtgggactcgatcagtcaagcttcttgaggttcctgta
acctctttgattcttgctgttgagcagtacttggcgccttttgttgttggtgtttttggt
gaacccctcgtcaacattgtgaagagtaggggaatcatctgggatgtcatctggaaggat
gcatcttcagattcagaccttaatgatgctatctcgaatactaatcttgataagggccct
ctttatctcaagtacaaagaggacgaaggtgaaaggaagagtcaagtacatatcagcagg
aaaaacatgggtcaattcctcatcttgatattccttccaccaatgtatcatctcctgttg
caaatggaagtatctgatgtttccacgttagctcgaattagaaccgatcactggccatcc
ctagcttatatagatgactatttggaagctttgtttttcgggtag
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