Diospyros lotus (date-plum): 127810076 Help Entry 127810076         CDS       T10632                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism dlt  Diospyros lotus (date-plum) Pathway dlt03013   Nucleocytoplasmic transport dlt03040   Spliceosome Brite KEGG Orthology (KO) [BR:dlt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     127810076   09122 Translation    03013 Nucleocytoplasmic transport     127810076  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dlt03019]     127810076    03041 Spliceosome [BR:dlt03041]     127810076 Messenger RNA biogenesis [BR:dlt03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      127810076 Spliceosome [BR:dlt03041]  Complex C   Other components    EJC/TREX     127810076  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     127810076 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 MCU ABPF_N DUF3530 Motif Other DBs NCBI-GeneID:  127810076 NCBI-ProteinID:  XP_052205276 LinkDB All DBs Position 9 Genome browser AA seq 1891 aa AA seqDB search MSLPPMECIYVTEDCIREWKSGDPCFKVPKPVPGLRFLYELCWTIVRGELPFQKCKAALE SVEFSDKVSDEEVGSNFADIVTQLALDLTMPGEYRARLMKLAKWLVESALVPLRLFQERC EEEFLWDSEMIKIKAADLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQGSEAS TQNGSAATVGIIKSLIGHFDLDPNRVFDIVLECFELQPDNSVFLDLIPIFPKSHASHILG FKFQYYQRMEVNCPVPFGLYQLTALLVKKEFIDLDSIYAHLLPKDDGAFEHYNMFSAKRL DEANKIGKINLAATGKDLMDDEKQGDVTIDLFSALDLENEAVSERASELENNQTLGLLTG FLSVNDWYHARVLFERLSALNPAEHIQICNELFRLIEESISLSYELARRIHLQSLGLHSA AGGEPMETNSSARGSFIDLPKELFEMLSCAGPYLYRDTLLLQKVCRVLRGYYLSALELVS TGDGVLDTETVITGNRTPRLHLKEARLRVEEALGTCLLPSLQLIPANPAVGQEIWEVMNL LPYEVRYRLYGEWEKDDERIPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHAN PMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGREKLKDDGLNL SDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGNGIELVLLQELIQQMANVQYTEN MTEEQLDSMAGSDTLRYQATSFGITRNNKALVKSTNRLRDSLLPKDEPKLAVPLLLLIAQ HCSVVLINSDVPYIKMISEQFDRCHGTLLQYVEFLCSAVTPTAAYALLIPPLDEIVHRYH LDPEVAFLIYRPVMRLFKCQSNSDVFWPLDHADATKSSISEKESHTAESSGKLVLDLGPS RKSIMWSDLLETVRTMLPAKAWNSLSPDLYATFWGLTLYDLYVPRSRYESEMTKQHAALK ALEELSDNSSSAITKRKKDKERIQESLDRLMSELQKHEEHVSSVHSRLAREKDKWLSSCL DTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDALICKTLQPM ICCCTEYEVGRLGRFLYETLKIAYHWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQF IKVHWKWSQRITRLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKSGINLEKRVTKIKS DEREDLKVLATGVAAALAARKPSWVSEEEFGMGYLELKLAPSLPSKPLAGNLVSVQNGSG IIVSQGEPTGGRVVAAGTQHSDTGTAIKDQISRTKPVDGRLERTESAALKSDQGHAKPKG LSLINGSDAQPSAAQAGTSKSIENYKQMDDTINQTLDDSVTKVGTKASAESEARAPVKRS LPSGSLSKQIGKDDSKSVKAVGRTLGLSSTSDRDPTHLLEGRQGGTANVLSSGSHNGNMN PNLVKGSTPATKLFDIHGSEPKAGSGAAKSSDLRVSASKDDNTEVPDIQKPLSSRPVHSP RHDNSAAASKSSDKQQKRASPAEEPDRLNKRRKGEIDSRDLEGEVRASEKERSLDPRLVD KHFPVDLEKSGSEDQITNRAMDKPLDRSRDKGSERHDRDHRERLEVPDKSRGDDVILEKS RDRSMERYGRERSVERGQDRVSDRGFDRLAEKAKDDRIRDDRTKMRYSEASTEKSHLEDR FHGQNLPPPPPLPPHMVPQSVNAARRDEDADRRFGSTRHSQRLSPRHEERERRRSEESTF LSQDDAKRRREEDFRDRKREDREGLSTKVDEREREREREKTTLLKEDLDATAASKRRKLK REHLPEAGEYSPAGPPPPLNVSTPQPYDGRDRGDRKGSTVQRPSYLEEPGLRIHGKEATA KMTRRETEQMYEREWEDEKRQRTEPKRRHRK NT seq 5676 nt NT seq  +upstreamnt  +downstreamnt atgtctctcccccctatggagtgcatatacgttaccgaagactgtataagggaatggaag agcggagacccttgcttcaaagtcccgaagccggttccagggcttcgttttctctatgag ctttgctggaccatagttcgcggagagttgccgtttcagaagtgtaaagcggcactagag tcggttgagttttcggataaagtctctgatgaagaagtgggttcaaattttgcggatatc gtgacccagttggctctggatcttacaatgcctggagagtatcgtgcacgtctcatgaaa ttggcaaaatggctggtggaatctgcattagttccattgaggctctttcaggagcgctgt gaggaagagtttttatgggactctgaaatgatcaagataaaggctgctgatttgaagtct aaagaggtcagagtgaacactcgtttgctttatcagcaaaccaaatttaaccttcttcgg gaagagagtgagggctatgctaagctggttaccctcctttgtcaaggttctgaagcatca actcaaaatggttcagcagcaacagttggcatcattaagtcactaattggacactttgat ttggatccgaaccgtgtattcgatattgtactggagtgttttgagcttcagcctgataac agtgttttcttggatctgattccaatatttcccaagtctcatgcttcccatattcttggt tttaagtttcaatactatcagcgaatggaggtgaattgccctgtaccatttgggctctat cagctcactgctttacttgtgaagaaagaattcattgatcttgatagcatatatgcacat ttacttcccaaggatgacggggcatttgagcattataatatgttttctgctaagcgactt gatgaggccaataaaattggcaaaataaatcttgctgccactggaaaagatcttatggat gatgagaagcaaggagacgtgacaatagatcttttttcggctttagacttggaaaatgag gcagtcagtgagcgagcttcagagcttgaaaataatcaaactttgggcttgctaactgga tttctttcggtgaacgactggtatcatgcccgtgtcctgtttgaacgactttcagctctt aatccagcagaacatattcaaatttgtaatgaattgtttaggctcattgaagaatccatc tccttgtcatatgaacttgctcgacggatccatcttcagagcttaggcttgcattcggca gctggtggtgagcctatggaaacaaattcatcagcccgtggatcctttattgatcttcca aaggaactttttgagatgctttcttgtgctggaccttatctttaccgtgatacattactg ctgcagaaggtgtgtagagtactgagaggctattacctttcagcacttgagctcgtcagt actggtgatggagttttagatactgaaactgttattactgggaatcgaactcctcgtctt cacctaaaagaagccaggttaagggttgaggaagccctgggaacgtgtttactcccttct ttacagttaatacctgcaaatccagcagttgggcaggagatatgggaagttatgaatctc cttccatatgaggtacgatatcggctgtatggtgaatgggaaaaagatgatgagaggatt ccaatggttttggctgccaggcaaactgcaaagttagacactagaaggatcttgaagcgc cttgcaaaggaaaacctgaagcagctgggtcgaatggttgcaaagctagctcatgccaat ccaatgactgtgcttcgaacaattgttcatcagattgaggcatacagggatatgattacg cctgtggtggatgcgttcaagtacttgacacagcttgagtatgatattttggagtatgtc gtgattgagcgtttggcacaaggtgggcgtgagaagctgaaagatgatggccttaatttg tcagactggcttcaatctttggcttcgttttggggtcacttgtgcaagaaatacccatca atggaactaagaggtctttttcagtaccttgttaatcaattgaaaaaagggaatggaatt gaacttgtcctcctacaggagcttatccagcaaatggcgaatgtgcaatacacagagaac atgactgaggagcagttagattccatggcagggagtgacactcttcggtatcaggctaca tcttttggaataacccgaaacaacaaggcattggtcaaatccactaacaggctaagggat tcattgctccccaaggacgaacccaagttagcagttccacttctgttgcttattgcccaa cattgttctgtggtcctcattaattctgatgtgccatacattaagatgatcagtgagcag tttgacagatgccatggaacccttctccaatatgttgaatttctgtgtagtgctgtcacg ccaacagcagcatatgctctgctgattccacctcttgatgagattgtacaccgttaccac cttgatcctgaggtggcttttttaatttatcggcctgtgatgaggctcttcaagtgccag agtaattctgatgtcttctggcctttagatcatgctgatgctaccaagtcttccatttct gaaaaggaatctcacacagctgagtcatctggaaaactggttctggatcttggtccttct cgaaagtctataatgtggtctgatcttcttgagactgttaggactatgttgcctgcaaaa gcttggaacagcctttctccagatctatatgccactttctggggtcttacactttatgat ctttatgttcctagaagtcgctatgagtctgaaatgaccaagcagcatgctgctcttaaa gctctggaagaactctctgataattcgagttcagcaataacgaagaggaagaaggacaag gaaagaattcaagaatctttggatcgtctcatgagtgaactccagaagcatgaagaacat gtttcatctgttcatagtcgtcttgctcgtgagaaggacaagtggttgagttcctgccta gataccttgaagattaacatggagttcctccagcgctgtatttttccacgctgtactttc agtatgcctgacgcggtttactgtgccatgtttgtacatactcttcattctctagggact ccatttttcaacactgtcaaccacattgatgctctgatatgtaaaaccttacaaccaatg atatgctgctgcactgagtatgaagtaggccgacttgggaggtttttatatgagacattg aagatagcttaccactggaagagtgatgaatcaatatatgaacgtgaatgtggaaacatg ccaggttttgctgtctactatagatatccaaacagccagcgtgtgacttatggtcaattt attaaggtacactggaaatggagtcagcggatcacaaggttgctgattcagtgtttggaa tccaatgaatacatggaaattcgaaatgctcttataatgttgacaaaaatttctggtgtt ttccctgttacacgaaagagtgggatcaatcttgaaaaacgggttactaaaattaaaagt gatgagagggaagatctcaaggtcttggccacaggtgttgcagcagcattggctgctagg aagccttcatgggtttcagaggaagagtttggcatgggctatcttgaactgaagcttgcc ccttcacttccttcaaaacctttagctggtaatttagtttctgtgcaaaatggttctggc attattgtttctcaaggtgagcccactgggggaagagttgttgccgcaggaactcagcat tctgatacggggactgctatcaaagaccagatatcaagaacaaaacctgttgatggaagg ctggaaagaacagaaagtgctgcactgaaatctgatcaaggacatgcaaaaccaaaaggt ttatccttaattaatgggtcagatgcccagccctccgctgcacaagctggaacatcaaaa tcaatagaaaattataaacagatggatgatactataaaccaaacactggatgacagtgtc actaaagtaggtacaaaggcatctgctgaatctgaggcaagagcacctgtaaagcggtca ttgccatctggatctctttcaaagcaaattgggaaagatgatagtaaatctgtaaaagct gttggcagaacacttggcttatcttctactagcgacagggaccccacccatctccttgag gggaggcaaggtgggacagctaatgtcttgtcctcaggttctcacaatggaaatatgaat ccaaatttagttaaaggctccacccctgccacaaaattatttgatatccatggaagtgaa ccaaaggcaggaagtggagctgcaaagtcatctgatttgagggtttctgcttcaaaagat gataacactgaagttcctgacattcaaaaacctctctcctcaagacctgttcattctcca aggcatgataactctgctgccgcatcaaaatctagtgacaaacaacaaaagagagccagc cctgctgaagaaccagatcgactaaataagcgtcggaaaggagaaattgattcaagagac ttagagggtgaagttcgagcctctgagaaagagaggtcacttgatccccgtcttgtggac aaacattttccagtggatctggagaaatctggatctgaggatcaaattacaaatagggcc atggacaagcccctggacaggtccagagataagggaagtgaacggcatgacagggaccat agggaaaggttagaggttcctgataagtcacgcggagatgatgttatattggaaaaatct agagatagatcaatggaaagatatggaagagaacgatctgtggaaagagggcaagacaga gtttctgataggggctttgacaggcttgcagaaaaagctaaggacgacagaatcagagat gatagaactaaaatgcgttatagtgaggcatctacagagaaatctcatcttgaagatcgt tttcatgggcaaaacttgccgccccctccaccattaccacctcatatggtcccacaatca gttaatgcagccagaagagatgaggatgctgacagaaggttcggaagtactagacatagt caaagactgtctccaaggcatgaagagagagaacggagacgatcagaggagagtactttt ctttcacaagatgatgcaaaacgtagaagagaagaagattttcgtgatagaaagcgggaa gatcgagaggggctgtctacaaaggtggatgagagggagagagaaagggagagagagaag acaacgcttctgaaggaggatttggatgcaactgcagcatctaaaagacgaaaactcaaa agggagcatctacctgaggctggtgaatattcaccagctggaccaccacctccattaaat gtttcaactccacaaccatatgatggaagagataggggggacagaaaggggtccacggtc cagcgtcctagttacttagaggaaccaggtttgaggattcatggtaaagaagctactgcc aagatgactcgccgtgaaactgaacagatgtatgaaagagagtgggaagatgagaagagg cagagaaccgaaccaaagaggcgacacagaaagtga

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