Diospyros lotus (date-plum): 127810222
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Entry
127810222 CDS
T10632
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dlt03000
]
127810222
Transcription factors [BR:
dlt03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
127810222
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
127810222
NCBI-ProteinID:
XP_052205523
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All DBs
Position
9:11789377..11798058
Genome browser
AA seq
1027 aa
AA seq
DB search
MSPHALNMEDTKPPGSVPAADNSVSNDGGAPSSDARFADFCKTGLSLNEKICTEAMELFN
KTKHLLSATMSAIGTGTAEDAENYWFAFVLFSVKRLSESSADDSSQGVGENGLTLCHILR
VAKLNIVDFFKELPQFIIKAGPILSNQYGADWVKRLEDKEMQANFVHLSLLSKYYKRAFG
EFFLASDSKVDEHSATANPTGYVSDYFRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILA
ILIIHVPVCFRNFTIHDSPRFVKNRKGVDLLASLCNIYETSEDELRTTMEKTNELLADIL
KKNPCPASECKSEILENIDTDGLIYFEDLLEGTSLSSSLNILERDYADATNGNCGLDERV
FVNDDDSLLGSGSLSGGTLIISGAKRKIDSIASPVKTITSPQSPYRSPSSSHTNGIVCGG
NSRITATPVTTAMTTAKWLRTVISSLPPKPSPELERFLSSCDRNVTTDVIRRANIIIEAI
FPHSGVGERCIAGSLQCTSLMDSIWAEQRRQEALKLYYRVLQAMCVAEAQVLHANNLTTL
LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE
LRRHLNSLEERLLESMVWEKGSSMYNSLIVARPAVSAEVNHLGLLAEPMPSLDAISVHMN
ISCGSLPLVPSLQKNEGSPAGQNGDVPSPKRLCTEYRSVLVERSSFASPVKDRLLAFNNI
KSKLPPPALQSAFASPTRPNPGAGGETCAEAAISIFFSKIVKLAAVRINGMVERLKLSQQ
IRECVYSLFQRILGQRTTLFFNRHIDQIILCCFYGVAKISQLNLTFREIIFNYRKQPHCK
PQVFRSVFVDWSSVHRNGKTGQEHVDIITFYNEIFIPAVKPILVDLASVGAAQKTNRNPE
TSNSADGQCPGSPKISPFPTLPDMSPRKVSAVHNVYVSPLRSSKMDALISNSSKSYYACV
GESTHAYQSPSKDLTAINNHLNGNRKLRGALKFDDVDVGLVSDSLVANSLYLHNGRSTTA
PVKSEQL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgcatgctttaaatatggaagataccaagccaccgggttcagtccctgccgcc
gacaattccgtctcaaacgatggaggggcaccttccagcgatgctcgatttgctgatttt
tgcaagactgggctctctttaaacgagaaaatttgcacagaagctatggagctgtttaac
aaaaccaaacaccttctatctgcaactatgtctgccattggcactggaacggcagaagat
gcagaaaactactggtttgcgtttgttttgttttctgtgaaaagattaagtgagagcagt
gcagatgattcaagtcagggagttggtgaaaatggactcaccttatgtcatatactgaga
gttgcaaaactgaacattgtggatttttttaaagaactacctcagtttattatcaaggct
ggtccaattttaagtaaccaatatggtgcagattgggttaagagactagaggacaaggag
atgcaggctaattttgtgcatttgagcctcttaagcaagtattacaagcgtgcatttggg
gaattttttttggcaagtgattcaaaagttgatgagcattcagctactgccaatcctaca
ggctatgtgtcagattattttcggtttgggtggttgttgtttctagcactccgtatacat
gcattcagtcgttttaaggacctggttacctgcacaaacggcttggtttctatcttggca
atcttaattattcatgtccctgtttgctttagaaatttcaccatccatgattctccccgg
tttgttaagaaccgcaaaggtgtggacctgcttgcatcactttgcaatatttatgagacg
tcagaggatgagttgaggacaacaatggaaaaaaccaatgaattattagcagatattttg
aagaaaaatccttgtcctgcaagcgaatgcaaaagtgaaattcttgagaatattgacaca
gatggtttgatttattttgaagatctactggagggcacatcactatcctccagtttaaat
attctagaaagagattatgctgatgcaacaaatggaaattgtggactagatgagagggtg
tttgttaatgatgacgatagcttgcttggttcagggagcttgtctggaggtacattgatt
attagtggggccaagaggaaaattgactcaatagcatctccagtgaagacaatcacaagc
ccacagtctccgtaccgctctccatcttcatctcatacaaatggaattgtttgcggtggt
aactccaggataactgctacacctgtaaccacagcaatgacaactgcaaagtggctacgg
acagtcatttcttcacttccaccaaaaccctcaccagagctagagcggttcctttcatcg
tgtgataggaatgtgaccactgatgtgatacgtagagcaaacataataatagaggctata
tttccacacagtggtgtgggagagcgatgcattgctggaagcctgcaatgtacaagcctt
atggacagcatatgggctgagcaacgaagacaggaagcactgaaattatattatagggtt
ctgcaagcaatgtgtgtagccgaggcccaggtgctgcatgcgaacaatttgacgacttta
ttgaccaatgagaggttccacagatgtatgcttgcctgttcagctgaactagttcttgca
acacacaagacagtgacaatgttatttcccgctgtgttggagagaacagggattacagct
tttgatctcagcaaggtgatagagagtttcattagacatgaggaatctcttcctagggag
ttgagacgacatctgaactccctggaagagcggcttctggagagcatggtatgggaaaag
ggatcctctatgtacaattctctaatagttgcaagaccagcagtttcagcagaagtaaat
catctgggcttgttagcagaaccaatgccgtcattggatgcaatttccgtccacatgaac
atctcttgcggaagcttgccacttgtgccatctttacagaagaatgaaggttcaccagca
ggtcagaatggagatgtcccatccccaaagagattgtgcacggaatatagaagtgtgctg
gttgagaggagttcatttgcctcaccagtgaaggaccgccttttggccttcaataacatc
aaatcaaagttaccacctcctgctttgcaatctgcatttgccagtccgacaaggccaaat
cctggagctggaggggagacgtgtgcagaagctgcaatcagtatattctttagcaagatt
gtaaagttagctgctgtcagaatcaacggaatggttgaaaggctaaagttatcccaacag
ataagagagtgtgtttactctctttttcaacggatccttggtcagcggacgactcttttc
tttaatcgccatattgaccagatcatcctctgttgtttctatggagttgcaaagatttct
caactgaacctgacttttagagaaatcattttcaactataggaagcaaccacactgtaaa
cctcaagtttttcgtagtgtgtttgttgactggtcatcagtgcaccggaatgggaaaacc
gggcaggagcatgttgatataattacattttacaatgaaatatttattcctgctgtaaag
ccaatactggtggaccttgcctctgttggagcagcccaaaaaactaaccggaatccagaa
accagcaatagtgcggatggtcaatgtcctggatcacctaagatatcaccatttccaact
ctacctgatatgtcaccaagaaaagtatccgcagtgcataacgtatatgtttcaccattg
cggtcatctaagatggatgctttaatatcaaatagctcaaaaagctactatgcttgcgtt
ggagagagcacccacgcgtaccagagcccctctaaagatcttactgccatcaataaccat
ttgaacggtaaccggaagctcagaggcgctctcaaattcgacgatgttgatgttggtttg
gttagtgactctttggtggcaaatagtctctaccttcacaatggtaggtcaacgactgca
cctgtgaaatccgaacaactttag
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