Diospyros lotus (date-plum): 127810404
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Entry
127810404 CDS
T10632
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127810404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127810404
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127810404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
DUF4651
RRM_11
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
127810404
NCBI-ProteinID:
XP_052205838
LinkDB
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Position
9:complement(624303..634018)
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AA seq
358 aa
AA seq
DB search
MSERKLVVLGIPWDVDTDGLRDYMSKFGELEDCIVMKERSTGRSRGFGYVTFTSVEDAKN
ALSSEHFLGNRMLEVKIATPKEEMRAQSKKITRIFVARIPPSVTEAAFRSHFEQYGDITD
LYMPKDPRTKGHRGIGFITFESAESVDNLMAESHELGGSTVVVDRATPKEEDFRPFSRMM
QGGYGAYNAYITSATRYASIGAPTLYDHPLSVYERGGSTRGMGRKIFVGRLSQEATADDL
RQYFGRFGRILDVYVPKDPKRTGHRGFGFVTFAEDGAAERVARRPHEICGQQVAIDSAAP
IDDAGSSGDLLDNTEPYVGYGGPMRTYGRMYQNLDFDNWSYGMSGGRPSRADLRYRPY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagaaagcttgtggtgttgggtattccgtgggatgtcgatactgatgggttg
agggattatatgagcaaattcggggaattggaggattgcatcgtgatgaaggagcggtcc
actggtcgttctcgtggttttggatatgtaacatttacatcagttgaggatgctaagaat
gcactgtccagtgagcactttcttggcaatagaatgctggaagtaaaaatagccacacca
aaggaggagatgagagcacagtcgaagaaaatcactaggatatttgtggcaaggatccca
ccatctgttacagaagcagcctttcgtagtcattttgagcaatatggtgatataacagat
ctatacatgccaaaggacccaagaaccaaagggcatcgtggaattggattcattactttt
gaaagtgctgaatctgtggataatctgatggctgaaagtcatgaactgggaggttccact
gtagttgttgaccgagcaacaccaaaggaggaggatttcagaccatttagccggatgatg
caaggtggatatggtgcatataatgcttatattacatcagcaactagatatgcctctata
ggtgctcctaccttatatgatcatccgctctctgtgtatgaaagagggggatctacacga
ggaatgggcagaaaaatttttgttggaagactttcccaggaggccacagctgatgatctt
cgccagtattttggtagatttggccgcattctggatgtttatgttccaaaggatcccaag
agaactggtcacagaggctttggctttgtgacttttgcagaagatggtgctgcagaacgt
gttgctcgaaggcctcatgagatttgcgggcagcaggttgcaatagattcggctgcacct
attgatgatgctggctccagtggagatttgttggataatactgaaccatacgtgggttat
ggtggtcctatgcgtacttatggacggatgtatcaaaacctggattttgacaattggagt
tatggtatgagtggagggagaccttcacgagcagatttgaggtatcggccatattag
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