Diospyros lotus (date-plum): 127810439
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Entry
127810439 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127810439
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
dlt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127810439
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127810439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127810439
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
127810439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127810439
NCBI-ProteinID:
XP_052205889
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All DBs
Position
9:complement(14186324..14191382)
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AA seq
643 aa
AA seq
DB search
MDPAAEEQLDFGDEEYGGAQKMQYEGSGAISALADDEMIGEDDEYDDLYNDVNVGEGFLQ
LQRSEAPGPPPGVGNGGFQNTDSSLPETRDEVAGSQQVSIHGVATEGKHSNPEIHSPESK
EGLTTDRGQVGTTDIAQARMVQGMTDGAQVGHMGFRGPTPIPNKLGVDSTKMSGKMVPES
APLPNPSTVGPRSVPQIPPNQVGMNPNANVNRPVVNENPSRLALENGGTMLFVGELHWWT
TDAELESMLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMNGHVFNGRAC
VVAFATPQTIKQMDASYLNKNQVQTQSQSQGRRPMNDGGRGSGMNQPGGDAGRNYGRGGW
GRGGPGGGPMRGRGGPMGAKNMVGNTSIVGSGGSGGAYGQGLAGPPFGGPPAGLMPPQGM
MGAGFDPTYMGRGAGYGGLGHPFPGMLPSFPAVNAMGLAGVAPHLNPAFFARGVIPNGMG
TMGPTGMDGHHAGMWTDTSMGGWGGEEYGHRTRESSYGGEDGASEYGHGEGSHEKEVRSN
VASREKERGSERDWSGNPEKRHRDEREMERDRYERDHRYREEKDSYREVRDQRQRDRDMG
YEDERDRGQSSSRTRNRSKAMPEDDRRRSRDADYAKRRRLPPE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcggctgaagagcaattagattttggagatgaggagtatggaggtgctcaa
aagatgcagtatgagggaagtggagcaatttctgctcttgcggatgatgagatgataggt
gaagacgatgaatatgatgatctctataatgatgttaatgttggagaaggcttcttgcag
ctgcagcgttcagaagcaccagggccacctccgggtgtgggtaatgggggattccaaaac
acagattccagtcttcctgaaactagagatgaagttgcaggatcacagcaggtaagcatt
catggggttgcaactgaagggaaacattcaaatcctgagattcattctcctgagtcaaaa
gaggggctgacaactgataggggacaagtgggaactactgacattgctcaagctagaatg
gttcagggcatgactgatggtgctcaagtaggacatatgggatttcgggggccaacacct
atccccaacaaattgggggttgattctactaaaatgtcagggaaaatggtccccgagtct
gctccattgccaaaccctagcacggttggtcctagaagtgttccacagataccgcctaat
caggtgggcatgaatcctaatgccaatgtgaaccgtccagtggttaatgaaaatcctagc
cgactggctttggagaatggaggaaccatgctctttgtgggagaactacattggtggact
actgatgcagagctcgagagtatgctatcacaatatgggagggtaaaagagattaagttc
tttgacgagagagctagtggcaaatcaaaaggctattgccaagttgaattttatgaccca
gctgcagcagctgcatgcaaagaaggaatgaatggtcatgtttttaatgggagagcttgt
gtagtggcctttgctactccacaaaccataaaacagatggatgcttcttatttgaacaaa
aaccaagtccagactcagtctcagtcacaaggaaggaggcctatgaatgatggggggaga
ggtagtggaatgaatcaacctggtggagatgcagggaggaattatgggagaggggggtgg
ggacgaggaggtcctgggggtggacccatgaggggaagaggtgggcctatgggagcaaag
aacatggttggaaacacttctattgttggaagtggtggtagtggaggagcgtatgggcaa
ggccttgcaggtcccccttttggtggtcctcctgctggtttgatgcctcctcagggtatg
atgggtgctggttttgatccgacatatatgggtagaggagcaggctacgggggcttaggg
catccttttcctggaatgcttccttcatttcctgctgttaatgcaatggggcttgctggg
gtggctcctcatctcaatcctgccttctttgcgagaggagtaatccctaatggaatgggg
acgatggggcccactggaatggatgggcatcatgctggaatgtggactgacacaagcatg
ggtggatggggaggagaagaatatgggcataggactagagagtcaagttatggtggcgaa
gatggtgcttctgaatatggacatggagagggtagccatgaaaaggaagtaaggtcaaat
gtggcttccagggagaaggaacgaggttctgaacgtgattggtcaggaaatcccgagaaa
aggcatcgggatgagagggagatggaaagggaccggtatgagcgagatcacaggtacagg
gaggaaaaggatagttacagggaggtccgggaccagcggcaaagagaccgtgacatggga
tatgaggatgaaagggacaggggacaatcatcatcaagaactcgaaataggtctaaagct
atgccagaagatgatcgcaggcgatcaagggatgcagattatgcgaagcggagacgcctt
ccaccagagtga
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