Diospyros lotus (date-plum): 127810557
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Entry
127810557 CDS
T10632
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
127810557
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Gene cluster
GFIT
Motif
Pfam:
NHL
HAD_2
Hydrolase
Thioredoxin_8
TEN_NHL
Redoxin
AhpC-TSA
Hydrolase_like
Thioredoxin
DUF5128
HAD
Motif
Other DBs
NCBI-GeneID:
127810557
NCBI-ProteinID:
XP_052206054
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Position
9:34397495..34427495
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AA seq
1083 aa
AA seq
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MAVRLLSPNPCCSESKLTALFYCSSLVSRPNCLVRRRQRTVQLPRRRRPAVATPRACVKL
EEKNVPETGSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVEVTVDDFVPFMGTG
EVNFLGGVASVKGIKGFNAEAAKKRFFEIYLDKYAKPDSGIGFPGALELITQCKSKGLKA
AVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILDVPTSECIV
IEDALAGVQAAKAAQMRCIAVTTTLSEDTLKKAGPSLIRQEIGSISLDDILSGGSVSNNE
KMQGPQLGNSSAQMSPPPLKDRRESGPFPDINSSNNAAFSIGELQGSRRDILRYGSLGVA
ISCFIFTITNWKAMQYASPKAIWNLLFGVVKPSFVQNKGLPHSARVQQFVNYISELETGG
TARIVPEFPSKLDWLNTPPLKLGRDLKGKVVLLDFWTYCCINCMHVLPDLEFLEKKYKDM
PFMVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMYLWRELGINSWPTFAIVGPS
GKLLAQISGEGRRKDLDDLVEAALLFYGEKKMLNNNPIPLSLEKDNNPLLLTSPLKFPGK
LAVDVLNNRLFISDSNHNRIVVTDLDGNFIVQVGSTGEEGFQDGNFDDAAFNRPQGLAYD
AKKNLLYVADTENHALRVIDFVKEMVKTVAGNGIKGSDYRGGGKGTAQLLNSPWDICYDP
VKEIVYIAMAGQHQIWEHSTPNGITRAFSGDGYERNLNGSSATSTSFAQPSGISLAPDLK
EAYIADSESSSIRAVNLKTGGSRLLAGGDPVFSDNLFRFGDHDGTGSEVLLQHPLGVLSG
KDGQIYIADSYNHKIKKLDPATKRVYTLAGTGKAGFKDGKALEAQLSEPAGIIEAQNGRL
FIADTNNSLIRYLDLDKEEAKLLTLELKGVTPPTRKSKSLKRLRRRAADTEIVTIDGGSS
SEGNLFLKVSVPEGYHFSKEARSKFSVEIEQENQVVIDPREGYLSPEGSASLHFRRMSDS
AITGRINCKVYYCKEDEVCLYQSLAFEVPFREVTPDSSPAEVTLAYLVKPKTSAGSSLLP
VAR
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagactgttgtctccgaatccgtgttgttcagaatcgaagctcaccgccttg
ttctactgctcgagcttggtttccagaccgaactgtctggttcggcggcggcagaggacg
gtgcagctcccgcgtcggcggagaccggcggttgcgacccctagggcgtgcgtgaagttg
gaggagaagaatgtgccggagacaggaagcgagtgggggaaggtgtcggcggtgttgttc
gacatggacggggtcctctgcaacagcgaagatctttccaggagagcggcagtcgatgtc
ttcgctgaaatgggggtcgaagttaccgttgatgacttcgtgcctttcatgggcactggc
gaagtaaacttcttaggaggtgtagcttctgtgaagggtatcaaaggattcaatgctgag
gcagcaaagaaaaggttttttgagatatatctagataagtatgcaaaaccagattctgga
ataggattccctggtgccctcgaactcattactcagtgcaaaagcaaggggctcaaagct
gctgttgcatctagtgcagatcgcatcaaggttgatgcaaatttagccgctgcaggttta
ccggtgtcaatgtttgatgctattgtgtctgcagatgcatttgagaatctaaagcctgcc
cctgatatttttctatctgcatctaaaattttggatgtgccaactagtgagtgtattgtt
attgaagatgcattagctggagtgcaggctgctaaagctgcgcagatgagatgtatagcc
gtgacaacaacattgtcagaagacactctaaaaaaggctggtccatcacttatcagacag
gagataggaagtatttcacttgatgacatacttagtggtggctctgtttcaaataacgag
aagatgcagggaccccaacttggcaattcctctgctcaaatgtctccaccacctctcaag
gatagaagagagagtgggccattcccggatataaattcttcaaataatgcggccttctca
attggagaattgcagggttctcgtcgagatattttaagatatggaagtctgggggttgct
atctcttgtttcattttcacgattactaactggaaggcaatgcaatatgcatctccaaag
gccatttggaacttgctatttggagtagtcaaaccctcttttgtacagaataaaggttta
ccccattctgctagagttcaacaatttgtgaactatatatctgaattggaaaccgggggg
actgctcgtattgtgccagagtttccatcaaaacttgattggctaaatacacctcccctt
aagctaggcagggatttgaaaggaaaagttgttcttctggacttttggacctactgttgt
ataaattgcatgcatgtcctgccagatctagagtttttggagaaaaaatacaaagatatg
ccattcatggttgttggagtgcattctgcaaagtttgataatgagaaagatttagaagcc
atcaggaatgctgtcctgcgctatggaatcactcacccagttgtcaatgatggggatatg
tacttgtggcgggagctagggattaattcctggcctacatttgctattgttgggcccagt
ggtaagctccttgcacaaatatcaggtgaaggtcgtcggaaggatcttgatgatttagtg
gaagcagctcttctgttctatggtgaaaagaagatgttgaacaacaaccccattcccttg
agtttggagaaggataataatccccttttattgacctctcccttgaagtttcctggcaag
ctggcagttgatgtcctcaataaccgactcttcatttctgacagtaaccataacagaata
gtggtaaccgacttggatgggaattttattgtccaagttgggagcacaggagaggaaggt
ttccaagatggtaactttgacgatgctgctttcaatcggccacagggtcttgcttatgat
gcaaagaaaaatcttctttatgtagcggatactgaaaaccatgctttaagggtgattgat
tttgtcaaagagatggtgaagactgttgctggaaacggaatcaaaggatctgactacaga
gggggagggaaaggcactgctcagcttcttaattctccatgggatatctgctatgatcca
gtcaaagagattgtttacattgcaatggctggacagcatcagatttgggaacatagtaca
ccaaatgggattacaagagcttttagtggtgatggttatgaaagaaacttgaatggttca
agcgctacaagcacgtcatttgcgcaaccttctggaatttccttagcacctgatttgaag
gaggcatatattgctgatagtgaaagtagctccatacgagcagttaatctgaaaacagga
ggatcaagattactagctggcggggatcctgtgttctcagataatttgtttaggtttgga
gatcatgatggaacagggtctgaagtacttcttcaacatccactgggcgtgcttagtggg
aaggatggtcaaatttatatagcagactcttacaatcacaagatcaagaaattagatcca
gctactaagagagtgtacactttagccggtactggcaaagctggtttcaaggatgggaag
gccttggaagctcagctttcggagccagcaggaatcattgaggcacaaaatggaagactg
ttcatagctgatacaaacaatagtctaattagatatctagatcttgacaaggaagaagct
aaacttcttactttggagctgaaaggagttactcctcctacacgaaaatccaagtcttta
aagcgccttagaaggcgagcagcagacacggagattgttacaattgatggtggttcatct
agtgagggcaacttattccttaaagtatcagtgcctgaagggtaccatttctcaaaggaa
gcacgtagcaagttcagtgtagaaattgagcaagagaatcaagttgttattgaccctcgg
gaaggatatctcagcccagaaggatctgcatctcttcattttagaagaatgtctgattca
gctatcacagggcgaattaactgcaaggtttactattgtaaggaggatgaagtctgcttg
taccaatctcttgcctttgaagtacctttccgagaggtaaccccggactcttctccagca
gaagtgacactggcatatcttgtgaagcccaaaacatcagcgggcagctcactgttacca
gttgctcgctga
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