Diospyros lotus (date-plum): 127810862
Help
Entry
127810862 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127810862 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127810862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlt03009
]
127810862
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
GTPases
127810862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
EFG_IV
MMR_HSR1
RNase_3_N
Motif
Other DBs
NCBI-GeneID:
127810862
NCBI-ProteinID:
XP_052206402
LinkDB
All DBs
Position
1:16550023..16575237
Genome browser
AA seq
1064 aa
AA seq
DB search
MSDFDCKKMRNICILAHVDHGKTTLADHLIASYGDGVLHPKLAGKVRYMDYLDEEQRRAI
TMKSSSISLQYNDHFINLIDSPGHMDFCCEVSSAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPVLVLNKIDRLICELKLSPMEAYTRLQRIVHEVNGIMSAYKSEKYLSDVDSI
LAGPSSEVGDGNQEFIEDDEEDTFQPQRGNVAFVCALDGWGFSIIEFAEFYASKLGASTT
ALLKSLWGPWYFNSKTKMIVGKKGISGGSKARPLFVQFVLEPLWQVYQAALEPDGDKGVL
DKVITSFNLSIPPRELQNRDPKAVLQAVMSRWLPLSDAILSMVVEYMPDPIAAQSLRIAR
LLPQREIINDGIPPNVLAEAELVRRSVEACDSRPDAPCVAFVSKMFAVPAKMLPRKGLNG
EVLNNSTDEGRNSESDECFLAFARIFSGVIHSGQRIFVLSSLYDPLKGASVQKHVQEAEL
HSVYLMMGQGLKLVASAKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSMVFQVSPTLKV
AIEPSDPADMGAFMKGLKLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCVKDLKDRFAK
ISLEVSPPLVSYKETIEGESSNPLENLKLPTGSSDYVEKVTPNGRCVVRVHVLKLPPALT
KVLDESSDLLTSIIGGKLGHSDKNFGTQLTSIVADENPIETLKKRVMDAIESDIPSESAE
IDKDRVEIRKQLWERVLKKMWALGPHRVGPNILLTPDSKVKATDGSVLVRGSPCVSEKLG
FLIKSNNGIIASEASSAETQALYQEEESLESSVVSGFQLATEAGPLCDEPMWGLAFVVEV
YISPLIVQLNESESSHQPEQYGIFSGQVVTAVKDACRAAVLKRKPRLVEAMYFCELNTAT
EYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVAESFGFVDELRRWTSGAASALLV
LSHWEVLSEDPFFVPKTEEEIEEFGDGSSVPRNTARKLIDAVRRRKGLPVEEKILKRNIE
LHSSSDTTGLIADKLKWGNSQDLNQILERHLGNLIWFSALIFVS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcgattgcaaaaaaatgagaaatatatgcattcttgcccatgttgatcat
ggaaagactacgcttgctgaccatttgattgcctcgtatggggacggagtactccaccca
aagctagcgggtaaggttagatatatggattatcttgatgaagaacagaggcgagctata
acaatgaagagctcttccatatccctgcaatacaatgatcattttataaacctcatagac
tctccaggtcatatggacttttgttgtgaggtctctagtgctgcccggttgagtgatggg
gctttggtgttggttgatgctgttgagggtgttcacattcagacacatgcagtgttgcgc
caagcttggatcgaaaagcttacccctgttttggtgctaaataagattgataggttgata
tgtgaattgaagttgagtcccatggaggcatatactcggttgcaaaggattgttcatgag
gttaatggaattatgagtgcctacaagtctgagaaatatctttcagatgttgattcgata
cttgcaggaccatccagtgaggtaggtgatggtaaccaagagttcattgaggatgatgag
gaagatacatttcaaccacaaagggggaatgtcgcttttgtgtgtgcattggatgggtgg
ggttttagcattattgagtttgcagagttctatgcatcaaaactaggggctagcacaact
gcattgctgaaaagtttatggggcccttggtatttcaattccaagactaagatgattgtg
ggaaagaagggaataagtgggggaagtaaagctcgccctttgtttgtccaatttgttctt
gagccactctggcaggtttaccaggcagctttggagcctgatggggacaaaggggtactt
gataaagtcattacatcattcaatttgtctatacctccccgtgaacttcagaacagggat
ccaaaagctgtgcttcaagctgtcatgagtcgttggctgcctttatcggatgcaatctta
tccatggtagttgaatatatgccagatccaatagctgcccaatctttacggattgcacga
ttgcttccacagagagaaattataaatgatggcattcctcctaatgtgcttgcggaggca
gagctagtaagaagatctgttgaggcttgtgactcacgtcctgatgcaccatgtgtcgct
tttgtgtcgaagatgtttgctgttcctgcaaaaatgctacctcgaaaaggcttgaatggt
gaggttttaaacaattctactgatgaaggcaggaatagtgaatctgatgagtgcttcctt
gcatttgcacggatttttagtggggttattcattcagggcagaggatttttgtactttca
tctttatatgatccgctaaaaggggcatctgtgcaaaagcatgttcaggaagctgagttg
cactccgtgtatctaatgatgggtcaaggcttgaaactagtggcatctgcaaaggctggg
aatgtagtggctattagaggtcttggccagcatatattgaaaagtgcgaccctttcatct
acaaagaactgttggcctttctcaagtatggtgttccaggtttcacccactcttaaagtt
gctattgaaccttcagacccagctgacatgggtgcattcatgaaaggtttgaagctcttg
aaccgtgcagacccatttgtagaggtcactgtgtcatctagaggagagcatgttcttgct
gctgctggggaggttcatcttgagagatgtgttaaagatttgaaggatagatttgcaaaa
attagcttggaagtctcaccgccactggtctcctacaaagaaactattgagggtgagtca
tccaatccattagagaacttgaagttgccaactggaagctctgattatgttgagaaggtg
accccaaatggtagatgtgtcgttcgtgtgcatgtcttgaagcttccacctgcattgact
aaggtgcttgatgagagttctgacctgcttacaagtattattggaggaaaattgggccat
tcagacaaaaactttggaactcagctgaccagtattgtagcagatgagaatccaattgaa
acacttaagaaaagagtcatggatgctatagagagtgatattccttctgagagtgcagag
attgacaaggatagggtagagattcgtaaacaattgtgggagagggttcttaagaaaatg
tgggcattgggtcctcaccgggtaggtcctaacatcctcttgacacctgattccaaagta
aaagcaactgatggttctgttctcgtccggggttccccttgcgtgtctgagaagctggga
tttttgatcaaatctaataatggcattatagcttctgaggcatcatctgcagaaactcaa
gcactgtaccaagaagaagagagtcttgagagcagtgttgtatctggattccaactagct
acagaagctggtccattgtgtgatgaacctatgtggggtctggcatttgttgtggaggtt
tacatttctccattgattgtgcagttaaatgaatctgaaagttctcatcaaccagaacaa
tatggtatattcagtgggcaggttgtgacagctgtcaaggatgcttgtagggcagctgtt
cttaagaggaaacctcggcttgtggaagccatgtacttctgtgagttgaacaccgcaact
gaatatttgggccccatgtatgcagtgcttgctcggaggcgggctagagttttgaaggag
gaaatgcaggaaggatctccattgtttactgtgcatgcctatgtgccagttgctgagagc
tttggctttgtggatgagctgagaagatggacgtcaggggctgcaagtgctctacttgtc
ctgagtcattgggaagtgctttctgaggatcctttctttgttccaaagacagaggaagag
attgaagagtttggagatggttctagtgtcccacgtaatacagcaaggaagctcattgat
gctgtgaggcggcgaaagggtctcccagttgaagaaaagatcctgaagagaaatatagag
cttcactcatcttctgacactacaggattaattgcagataagctaaaatggggaaattcc
caagacctcaaccaaattttagaaagacatctggggaatttgatctggttctcggcactg
atatttgtatcctaa
DBGET
integrated database retrieval system
