Diospyros lotus (date-plum): 127810976
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Entry
127810976 CDS
T10632
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127810976
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127810976
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127810976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-Nse
zf-ANAPC11
Prok-RING_4
zf-RING_10
Zn_ribbon_6
zf-RING_4
RING_XB3-XBAT31
TRAF3_RING
zf-RING_6
Rtf2
Sina_RING
Motif
Other DBs
NCBI-GeneID:
127810976
NCBI-ProteinID:
XP_052206587
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All DBs
Position
10:33567271..33573561
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AA seq
215 aa
AA seq
DB search
MVLNIDLNNPPLPADGMVPGGDPVDLSLSIGLPRESGLLPIRTTTSFESVDDEVIICSPR
SFAEARDKARRNRREVEVIDAENIFQTDQSEYHCWLAGIAGSVPITNKRCRRGSLEHTDA
NVNHPINSERNKKPESDHAAEDTEVPCIVVPFQKKPEFKCPVCISPVVEETSTKCGHIFC
KKCIHAAIAAQSKCPTCRRKLKVKDTIRIYLPASD
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttaatattgatctcaacaatccacctttacctgctgatggcatggttcctggg
ggtgatcctgttgatttaagtcttagcataggcctgcctagggagagtggactattgcca
atacgaacaacgactagctttgagtctgttgatgatgaagttataatatgctccccaaga
agctttgccgaggcaagggacaaggctagaaggaaccggcgggaggtagaggtgattgat
gcagaaaatattttccaaacagatcagtcagaatatcactgctggctggctgggattgct
ggatcagttcctatcactaataagcggtgcagaagaggatcactagagcatacagatgca
aatgttaatcatcccataaactctgagaggaacaagaaacctgagagtgaccatgcagct
gaagatacagaagtcccctgtattgtggtgccctttcagaagaaacctgaattcaaatgt
ccagtttgcattagtccagttgttgaagaaacatcaaccaagtgcggtcacattttctgt
aagaaatgcattcatgcggcgatcgcagctcagagcaaatgtccaacctgcaggagaaaa
cttaaagtgaaagataccatcagaatttaccttccagccagtgattaa
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