Diospyros lotus (date-plum): 127811390
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Entry
127811390 CDS
T10632
Name
(RefSeq) cell differentiation protein rcd1-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127811390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127811390
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127811390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
127811390
NCBI-ProteinID:
XP_052207161
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Position
10:23668824..23686276
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AA seq
440 aa
AA seq
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MPFRYLGIPLVAVKLRVRHYESLISKISDNIKAWQAASLSYAGRLELIHAMIQGVVCFWC
SILPVPAAVIDQIYSLCRCFLWNSKASLVSWKDVCLPKCEGGLGLKDLKSWNSGLLIKIL
WDIHRKDTLWVQWIHHEFLHSISIWQRQARNDDSLLMKRMMLIRDSMCEVRGSAEVAMSL
LESWANGPRFDVQVAYEFFLPKGQVKEIISIYPALSPPNLSPAQSNRVCNALALLQSVAS
HRETRMSFLNAQMPLYLYPLINTTWKSKPFEYLRLTSLGVIGALVKVGDTQVISFLLSTE
IIPLCLKTMETGSELSKSVATFIVQQILMDDVGLDYVCTTAERFFAVRQMLGNMVAALAQ
QPSSRLLKYIIRCYLRLCDNQRACDALRGCLPDMLRDGTFSAALQEDATTGRCLQQLLLK
VHGPRVAPQAGGGSNLMRGN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcgctatcttggtatcccgttggtagcggttaagcttagggtcagacactat
gagtcgcttatatcaaagatctcggacaatattaaagcttggcaagcagcttccctttca
tatgctgggcggctggagcttattcatgctatgatccaaggagtggtttgtttttggtgc
tcaattctcccggtcccagctgccgtcattgaccagatttatagcctatgcaggtgcttc
ctctggaactccaaggcctcccttgttagctggaaagatgtttgtttgcctaaatgtgaa
ggcggcttaggccttaaggatcttaaaagttggaactctggtctgcttattaagatccta
tgggacattcatcgcaaggacacgttgtgggttcaatggatccatcatgaattcttgcac
tcgatctccatttggcagaggcaggcccggaatgatgactcccttctgatgaagaggatg
atgcttataagggattctatgtgtgaggtgcgaggttcagcagaggttgcaatgagcctg
ctcgagagctgggccaatggtcctcggtttgatgtgcaagttgcctatgagttctttctg
ccgaagggacaagttaaggagataatttcaatataccctgctttatccccaccaaatctt
tccccagcacaatctaatcgagtttgtaatgcacttgcccttctccagtctgtggcctca
caccgagaaacgagaatgtcattcctgaatgcgcaaatgcctttatatctgtaccctctc
attaatacaacctggaaatcaaagccattcgagtatttaaggcttacttccttgggcgtc
attggtgcattggtgaaggttggtgatacacaggttatcagtttccttctctctactgaa
ataattcctctgtgcctaaaaactatggagacggggagtgaactatcaaaatcagttgct
acatttattgtacaacaaattttgatggatgatgtgggtctggattatgtatgtaccaca
gcagagcggttttttgctgtacgtcaaatgttgggaaatatggtggctgcacttgctcaa
caaccctcatcacgcctgctaaaatatatcattcgctgttatctccggctatgtgacaac
caaagggcttgtgatgcactgagaggctgcctgccagacatgctgagggatggcaccttc
agtgctgcacttcaggaagatgcaacaacaggaaggtgcttacagcaattgcttctcaaa
gtccatggacctcgtgttgcgccacaggctgggggaggatccaaccttatgagggggaac
taa
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