Diospyros lotus (date-plum): 127811392
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Entry
127811392 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127811392
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127811392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127811392
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127811392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
127811392
NCBI-ProteinID:
XP_052207163
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Position
10:23706456..23769381
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AA seq
318 aa
AA seq
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MAKLPQSLFMNSPLAGSVSPPQSASGTQGDKDRNMQLVQQLVLDLGNRDLRENALLELSK
MRELFQDLAPLLWNSFGTIIALLQEIISIYPLLSPPNLTPGQSNRVCNALSLLQSVASHP
ETRLPFLNAQIPLYFYPFLSTTSNSRPFEYLRLTSLGIIGALVKVDDTEVISFLLSTEII
PLCLKSMQMGNEPSKTVATFILQKILLEDVGLDYICMTAERFFSVAQVLGNMVAALAEQP
SSRLLKHIIRCYLRLSDNRRACDALTSRLPEVLRDGTFSASLQGDATTTRWLQQLLDKVE
GRRVALQAGREFYHMQMN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcttcctcaatctctcttcatgaactctccgctcgccggctccgtttcgcca
cctcagagcgccagcgggactcaaggagacaaggatcgcaatatgcaattagtccagcag
ttggtgctggatctcggcaaccgcgatctccgagagaacgctcttctcgaactgtccaag
atgagagaattatttcaagatttggctccattgttgtggaactcctttggtactattatt
gcacttttacaggagataatttcaatataccctcttttatccccaccaaaccttacccca
ggacaatctaatcgagtttgtaatgcactttcccttctccagtctgtggcctcacaccca
gaaacgagactgccatttctcaatgcgcaaattccgttatatttttaccctttccttagt
acaaccagcaattcaaggccatttgagtatttaaggcttacttccttgggcatcattggt
gctttggtgaaggttgatgatacagaggtcatcagtttccttctctctacagaaataatt
cctctgtgcctaaagagtatgcagatgggcaacgaaccatcaaaaacagttgctacattt
attcttcaaaaaattttgttggaggatgtgggcttggattatatatgtatgacagcggag
cggtttttttctgtagctcaagtcttgggaaatatggtggctgcacttgctgaacaaccc
tcgtcacgcctgctaaaacatattattcgctgttatcttcggctatctgacaatcggagg
gcttgtgatgcactgactagccgcctgccggaggtgctgagggatggcaccttcagtgct
tcccttcagggagatgccacaacaacaaggtggttacagcaattgcttgacaaagtcgag
ggacgtcgggttgcactgcaggctggaagagaattctaccatatgcaaatgaactaa
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