Diospyros lotus (date-plum): 127811535
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Entry
127811535 CDS
T10632
Name
(RefSeq) probable splicing factor 3A subunit 1
KO
K12825
splicing factor 3A subunit 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
Spliceosome [BR:
dlt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127811535
Complex B
127811535
Complex C
U2 SnRNP specific factors
127811535
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GFIT
Motif
Pfam:
PRP21_like_P
Surp
ubiquitin
MBDa
Motif
Other DBs
NCBI-GeneID:
127811535
NCBI-ProteinID:
XP_052207445
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Position
10:33277444..33285333
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AA seq
819 aa
AA seq
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MLGTLPILPLPAPPSDGDLGPLPPSQVPEQSDDEKKSEAEDQNQANRANSVPTSIATHTR
SIGMVHPPADVRNIVDKTAQFVAKNGPEFENRIIANNAGNVKFSFLNTSSPYHAYYQHRL
SEFRAQNQASIQQQLSSEPVESSAPETAPSAPVSDGNEAGAKPDPSALFRPVRKVLEPPE
AEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMF
FTSLADAYSKVLMPPKGLTDKLKKSVTDMTTVLERCLHRLEWERSQEQARQKAEDEIEQE
RLQMAMIDWHDFVVVETIDFADDEDEELPAPMTLEEVIRRSKMTTMVEEDIVEPGKEVEM
EMDDEEVQLVEEGMRAANLEENGEVRKNEMRATPEEQEPPMRIVKNWRRPEERIPAERDP
TKYVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDEEISRNIVGL
ARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTATQAMSMNTSGEDQ
NDAASNDSRNLPGPAAPPPPKPGVPSIRPLPPPPGLALNLPRVPPNAVQYSGPTSSGMLV
PPPPRPPVVNMIPSIRPPPPPISLIPGQQHLSVNHPPPMPPNSVNPPSIPIPPPPGSQFT
PLSAPRPFVPLPVPQPGVHMVPPPPLPQGMPPPPPPEEAPPPLPDEPEPKRQRLDDSALI
PEDQFLAQHPGPVRINVSVPNVDEGNLKGQVLEITVQSLSETVGNLKEKIAGEIQLPANK
QKLSGKAGFLKDNLSLAYYNVAGGESLTLSLRERGGRKR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtacgctaccgatattacctcttccagcaccaccctctgatggggatcttggc
cctcttcctccatctcaagttccagagcaatctgatgatgaaaagaaatcagaggccgag
gatcagaaccaagcaaacagagccaattctgttcctacatcaattgcaacgcacacgagg
agcattggaatggtacatccacctgcagacgtaaggaatattgtggataaaacggcacag
tttgtggcaaagaatggacctgagtttgagaatagaattattgcaaacaatgctggcaat
gttaagttcagtttcttgaatacatctagtccataccatgcttactaccagcaccgactc
tctgagtttcgtgctcaaaatcaggcttcgatacagcagcagctgtcttctgaaccagtg
gaatcatctgctccagagacagccccttcggctccagtttctgatgggaatgaggcaggt
gcaaaacctgatccctcagctctgtttaggcctgtccgcaaagttcttgagccccctgag
gctgagcagtatactgttaggcttccagagggaattacaggagaagaattagatattatt
aaactcacagcccagtttgttgctcgaaatgggaaatctttcttgacaggacttactagc
agagagattaacaatccccaattccattttttgaagccaacacacagtatgttcatgttt
tttacatcacttgctgatgcgtattcaaaagttttgatgcctccaaagggattgacagac
aagttgaagaagagtgttactgatatgactaccgtgcttgaacggtgcttgcatcggttg
gagtgggagcgctcacaagagcaggcaagacagaaagctgaagatgagattgagcaggag
cgcttgcaaatggctatgatagattggcatgactttgttgtggttgagactatagatttt
gcagatgatgaggatgaggagttacctgctccaatgacccttgaggaggttataaggagg
agcaagatgacaactatggtagaagaagatattgttgagcctggaaaggaggtggaaatg
gagatggatgacgaagaggtgcaacttgttgaagaaggtatgagagcagctaatcttgaa
gagaatggagaagtgaggaagaatgagatgagagcgactccagaggaacaggaaccacca
atgagaattgtgaagaactggaggaggcctgaggaaaggatccctgcagaaagagaccct
acaaaatacgttgtttcaccaatcactggtgagctaattcccattaatgagatgtctgaa
catatgaggatttctctcattgatccaaagtacaaggagcagaaagagagaatgtttgca
aagattcgagagactactcttgctcaggacgaagaaatttcccgaaacatagtgggacta
gcacgaacccgacctgatatttttggtaccactgaggaggaagtttctaatgcagtcaag
gctgagatcgagaagaaaaaagatgagcaaccaaagcaggttatatgggatggtcacact
gggagcattggtcggactgcaacacaggccatgtccatgaataccagcggagaggaccaa
aatgatgctgcaagcaatgattcaaggaatcttcctggtcctgcagctcctccccctcct
aaacctggtgtcccatcaattcgaccactccctccgcccccaggactagctctaaatctt
ccacgtgtacctccaaatgcagtccagtattcaggtccaacaagtagtgggatgcttgtt
ccacctccacccaggccaccagttgttaacatgattccatctattcggccaccgcctcct
ccaatctccttaatccctggacagcaacatctttcggtaaatcatccacccccaatgcct
ccaaattctgtgaatccacctagtattcctataccgcctccacctgggtctcaatttaca
cctttgtcagcacctcggccttttgttcctcttcccgtacctcagcctggcgtgcatatg
gttccaccaccacctttacctcaaggaatgcctccaccaccaccacctgaggaagctcct
ccaccgcttccggatgaacctgaaccgaagagacagaggctcgatgattctgcacttatt
cccgaagatcagttcctggcacaacatcctggacctgttcgcatcaacgtttctgtgcca
aatgttgacgaaggaaacctcaaggggcaagtactggagattacagtgcagtccttatcc
gaaactgttggcaatctgaaagagaaaattgcaggggagatccagcttcctgccaacaaa
cagaagctgagtggaaaggcaggtttcctgaaggataatctatcacttgcttattacaat
gttgcaggaggggaatcacttactctttctttaagagaacgaggtggtaggaagagatga
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