Diospyros lotus (date-plum): 127811580
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Entry
127811580 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127811580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127811580
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127811580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
127811580
NCBI-ProteinID:
XP_052207525
LinkDB
All DBs
Position
1:52902423..52929620
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AA seq
267 aa
AA seq
DB search
MSNGALEHRLPQGLLFCRTCSVEMSGRFSRTIYVGNLPADIREREVEDLFYKYGRILDIE
LKIPPRPPCYCFVEFENARDAEDAIKGRDGYNFDGCHLRVELAHGGRGPSSSSDRRGGYG
GTGGSSGRYGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGLVD
YTNYEDMKYAIRKLDDTEFKNPWTRTYIQVKMSDGSPSRSRSRSRSPRRNRRSPSISKSP
SRVKSSRPRSRSRSRSESPRQARSGSG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggagctctggagcaccgcttgcctcaaggattgctcttttgtcgaacgtgt
tcagttgaaatgagtggtcgtttctctcgaacaatttatgtgggaaaccttcccgcagac
ataagagaaagggaagttgaagatcttttctacaagtatggccgtatattggatattgag
ttgaagatccctcctaggcctccttgttattgttttgtggagtttgagaatgctcgagat
gcagaagatgcaatcaagggtcgagatgggtataacttcgatggttgtcatctgagggtt
gaacttgctcatggaggtcgagggccatcttcttcaagtgatcgtcgtggtgggtatggt
ggcactggtggcagcagtgggcgctatggcatttctcgtcattctgaatatcgagttatt
gttcgtgggcttccatcatctgcttcatggcaagatttgaaggatcatatgagaaaagct
ggtgatgtgtgctttgctgaggtttcccgtgatagtgatggaacatttggtcttgttgat
tatactaattatgaggacatgaaatatgctattcggaaactcgatgacactgaatttaaa
aatccttggaccagaacttacatccaggtgaaaatgtctgatggtagtccatcaaggagc
cggagccggagcagaagtcctagaaggaataggaggtcaccatcaatttctaaatctcct
tctcgtgtgaaatcatccagaccgaggtcgaggtcaaggtcgaggtctgaatccccccgt
caggctcgctcaggaagtggctga
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