Diospyros lotus (date-plum): 127811698
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Entry
127811698 CDS
T10632
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127811698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127811698
03110 Chaperones and folding catalysts [BR:
dlt03110
]
127811698
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127811698
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127811698
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127811698
Messenger RNA biogenesis [BR:
dlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127811698
Chaperones and folding catalysts [BR:
dlt03110
]
Heat shock proteins
HSP60 / Chaperonin
127811698
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127811698
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127811698
Exosomal proteins of other body fluids (saliva and urine)
127811698
Exosomal proteins of breast cancer cells
127811698
Exosomal proteins of colorectal cancer cells
127811698
Exosomal proteins of bladder cancer cells
127811698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
127811698
NCBI-ProteinID:
XP_052207782
LinkDB
All DBs
Position
10:32695786..32701401
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFAANLASKARVARNTTQQIGGRLNWSRNYAAKDIRFGVEARGLMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNEK
NQKCELEDPLILIHEKKISSINAIVKVLELALKRQRPLLIVAEDVESDALATLILNKIRA
GIKVCAVKAPGFGENRKANLQDLATLTGGDVITEELGLNLENVNLDMLGSCKKVTISKDD
TVILDGAGEKKAIEERCEQIRSAIEVSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVNDALNATKAAVEEGIVPGGGVALLYASKELDKLHTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVELPKDEKPVPGMGGGMGDMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcttcgccgcaaaccttgcctccaaagctcgggttgccaggaacaccacccag
cagattgggggcagattgaactggagcagaaactatgccgcgaaagacatcagattcggg
gtggaggctcggggtttgatgctaaagggtgttgaagagcttgctgatgctgttaaagtg
actatgggcccgaagggtcgcaatgtagtgattgaacaaagctttggtgcccccaaagtg
accaaggatggtgtaactgttgcaaagagcattgagttcaaggacaaagtcaagaacatt
ggtgcaagccttgtaaaacaggttgctaatgcaaccaatgatgtagctggtgatggtact
acatgtgctacagttcttacccgagcaatatttaccgaaggttgcaaatcagttgctgct
gggatgaatgctatggacttaagacggggaattactatggcagttgatgctgtagtaaca
aacttgaagagcagggcaaggatgattagtacatctgaagaaatagcccaggtggggaca
atatctgcaaatggtgaaagagaaataggtgagctgatagcaaaggcaatggaaaaagtt
ggcaaggagggagtcatcacgatttcagatggtaagacactgtataatgaattagaagtt
gtagagggtatgaaactggataggggctacatatccccatatttcatcacgaatgagaag
aatcagaaatgtgaattggaagaccctctaattctcatccatgagaagaaaatctcaagt
ataaatgctatagtgaaagttcttgagttggcattaaagaggcaaaggcccctgttaatt
gttgcagaagatgtggaaagtgatgctctagcaactcttattctcaacaaaattcgcgct
ggaatcaaggtttgtgctgtaaaagccccggggtttggagagaacaggaaggccaatctg
caggatcttgcaactcttactggaggagatgttataactgaagaacttggtttgaatttg
gagaatgtgaatttggacatgcttggatcatgcaaaaaggtcacaatctccaaggatgac
acagttattcttgatggtgctggagagaagaaggcgatagaggaaagatgtgaacagatt
aggtcagcaattgaagtaagcacttctgattatgacaaggagaaactgcaagagagatta
gcaaagctttctggaggtgttgctgtattaaagattggaggagcaagtgaagctgaagtt
ggggagaagaaagacagagtgaacgatgctctgaatgctactaaagctgctgtagaagaa
ggaattgtaccaggtggtggtgttgctcttctttatgcatcaaaagagttggataagctg
cacacagccaattttgatcagaagattggtgttcagattattcagaatgctctaaagaca
cctgttcacacaattgcctccaatgctggagttgagggggctgttgtcgtcggcaaacta
ttggagcaagacaaccctgatcttggatatgatgctgccaaaggtgaatatgtagatatg
gtaaagtctggaattatcgacccactgaaggtcataagaactgctctggttgatgcagca
agtgtctcgtcgctgatgacaaccaccgaagcagttgtagtcgaacttcccaaggacgag
aagccagtcccgggtatgggtggcggcatgggtgacatggattattaa
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