Diospyros lotus (date-plum): 127811833
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Entry
127811833 CDS
T10632
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127811833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127811833
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127811833
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
U-box type E3
127811833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
KAP
zf-Nse
HEAT_EZ
ARMC9_ARM
Arm_2
zf-C3HC4_2
MCAfunc
zf-NOSIP
zf-C3HC4
HEAT_EF3_GNC1
DUF6833
Motif
Other DBs
NCBI-GeneID:
127811833
NCBI-ProteinID:
XP_052207982
LinkDB
All DBs
Position
1:28377407..28385950
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AA seq
657 aa
AA seq
DB search
MEDEKGALVQKLIDTVDEISAISDYRSTVKKQYCNLARRVKLLTPMFEEIRDSKEPVPEE
CFKGLRSLKEALESARDLLRFGSEGSKIYLVLERDQIMDRFGEVTARLEQVLGAISYEKL
DISDEVKEQVELVVGQFRRAKGRVDAPNVELYEDLLSLYDKSNDTLADPTVIRRVAGKLQ
LMGIADLTQESIALHEMVSASGGDPGESIEKMSMLLKKIKDFVQTENPNLDSPAQEKSKC
SGQASADGTQKLPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQ
QTLTSTALTPNYVLRSLIAQWCEANGIEPPKRPNSRPNKTLSACSPAERTKIETLLRKLT
SNSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLS
ICEDNKGSIIFSGAVPGIVHVLKKGSMEARENAAAALFSLSVVDENKVTIGGSGAIPPLV
TLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGIVPTLMRLLTEPQGGMVDEALAILA
ILSSHPEGKAAIGAAEALPVLVEVIRNGSARNKENAAAVLVHLCSGDQQYMIEAQELGVM
GPLVDLSQNGTERAKRKAAQLLERMNRFVEQQKLAQAQAEAQNQQSRPPASANAVDS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagaaaggagctctggtgcagaagttgattgacaccgtcgacgagatatcg
gcaatctcagactacaggtctacggtcaagaagcagtattgcaacctagccaggagggtg
aagctgttgactccaatgttcgaagagattcgggacagcaaagagcccgtccccgaagag
tgcttcaaaggtctaagatccttgaaggaagctctcgaatcagctcgagacttgctcaga
ttcggaagcgaaggcagcaagatttacctggtcctagagagggatcaaattatggataga
tttggtgaagtgactgctcgtctagaacaagttttgggtgccatttcctatgaaaaactg
gatatatcagatgaagtcaaagaacaggttgagcttgttgttggtcagttcagaagagcc
aaaggaagagttgatgcacccaatgtcgagctgtatgaggatctcttatctctttatgac
aagagcaatgacacattggctgatccaacagtaataaggagagtggctggaaaattacaa
cttatgggaatagcggacctcacccaagaatccatagctttgcacgagatggtatctgcc
agtggtggggatccaggggagagcatagagaagatgtcaatgctactgaagaaaatcaag
gattttgtgcagactgaaaatccgaacttagattctcctgcacaggaaaagtcaaagtgc
agtggacaagcgtctgcagatgggacccaaaaattgcctgttataccagatgatttccgt
tgtccaatttcccttgagctgatgagagaccctgttattgtctccacggggcagacttat
gagcgttcctgtatagagaaatggctggaagcagggcatggcacttgtccaaagacgcaa
caaacactcacgagcactgccctaacccccaactatgttctgcgcagcctcatcgcccag
tggtgtgaggcaaatggaattgaaccaccaaaacgacccaattctcgacccaataagact
ttatcggcttgctcgcctgctgaacgaaccaagatagaaactcttctccgtaagcttaca
tccaatagtcccgaagatcagcggtcagctgctggtgaaattcgccttctagccaaacgc
aatgctgataaccgtgtcgccattgctgaagctggtgctattcctctacttgttggcttg
ctctccactcctgattcccgcactcaagagcatgctgttactgcacttctcaacctttca
atatgcgaggacaacaaaggaagcatcatattctctggcgcagtgcctggtattgtgcac
gtgctgaagaaagggagcatggaagcacgagaaaatgcagcggccgcgctatttagcctc
tcagttgtggatgaaaataaggtcacgattggtggatcaggggcaatcccgccactagta
accctacttagtgaaggtacacaaaggggcaagaaagatgctgcaacagcattatttaac
ttgtgcatataccaagggaacaaaggcaaggcagtgagggcaggaattgtgcccacgttg
atgcggctgctcaccgagccccaaggtggaatggtggatgaggcactagcaatactagcg
atactgtctagccatcctgaaggcaaggcagccattggagctgccgaggcattgccagtt
ttggtagaggtaattcggaatgggtcagccaggaacaaagagaatgccgctgcagttttg
gtccacctctgttcaggtgaccagcaatacatgatagaagctcaggaactcggagtgatg
gggccgctggttgatctatcacaaaatggtacggagagggccaaacgaaaggctgcacag
ttgcttgagcgaatgaacagatttgtcgagcagcagaagcttgcccaggcacaagcggag
gctcagaaccagcagtcccggccgcccgcctcagcaaacgctgttgatagttga
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