Diospyros lotus (date-plum): 127812055
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Entry
127812055 CDS
T10632
Name
(RefSeq) DNA topoisomerase 1-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlt03032
]
127812055
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127812055
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Topoisomerases
127812055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
127812055
NCBI-ProteinID:
XP_052208302
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Position
10:complement(24214492..24228793)
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AA seq
914 aa
AA seq
DB search
MKFKMMDEIDDDDAPIVFKRSSSASKQNPLTSSTKKSSSQRHDGQLGKRIDEAPSPNGQN
SVCQKGKLVPSTMASSAPNAHPEVSNSSAKASAVKSPLASPKTSTSSPTASHMRTMENSK
MPASAPDQSKHSSQQNTASAIKEELLFNTGLPHCDSEDSEDNKPLSSKLSTGLSKGNSNN
ANKGPKNSNLGSSSNQKPRIKHEDLDEEIPLSSKFQLKSNGGPANKKSCDFDEIKPVALK
LQQNGSPGKDNLLKKSSTLLNKRTADEFKSSSQSLIKRTKLVNGTSPSVSKQVSKKAESG
VDEEDDDHVPISQRMKKSPTLGNKLSSGKQKVAKVVSSSFKKTSKKSTKVVKNSKYSKSS
KVPPSSGEGQKWTTLVHNGVIFPPAYKPHGVKMLYKGKPVDLTPEQEEVGTMFAVMLDTD
YMNKPKFKENFMNDWRKILGKNHAIQRLEGCDFTPIYEWHQKEKEKKKQMSSEEKKALKE
EKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQAGDITINIGKD
APVPECPIPGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKS
RLLKDYIQGIRVTYTKNFASKDITKQQVAVATYLIDKLALRAGNEKDDDEADTVGCCTLK
VENVEPIPPNFLKFDFLGKDSIRYLNQVEVELPVFKAIQQFRTGKSGGDDLFDKLDTSKL
NAHLKELMPGLTAKVFRTYNASITLDEMLNRETRGGDFAEKVVVYQHANKEVAIICNHQR
TVSKSHSAQMLKLNEKIEELKGILDGLKKDLARVKKGKPPLKSADGKTKKNMNPEALERK
IAQTTTKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKIFNKSLLA
KFAWAMDVDPSFRF
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaaatgatggatgagattgatgatgatgatgcacctatagtttttaagcga
agtagctcagcatcaaagcaaaatccactgacatcatcaacgaagaagtcatcatctcaa
aggcatgatggacagttggggaagcggattgatgaagcaccttctcctaacggtcagaac
tccgtttgccagaagggtaaactggttccatctaccatggcatcatcggctcccaatgca
catcctgaagtgtccaattcatctgccaaggcatcagcagttaaatctcctttagcaagc
ccaaaaacttcaacttcatctcccacagcatcacatatgagaacaatggaaaattcaaaa
atgccagcttcagcacctgatcagtcaaaacattcttctcaacagaataccgcctcagct
attaaggaggagttgctgttcaatactggtttacctcattgtgactctgaggattcagaa
gataataagccactgagctctaaactctctactggattatcaaagggaaattccaacaat
gccaacaagggaccaaaaaattctaatctgggttcatcttcaaatcagaaaccaagaatc
aaacatgaggacttagatgaggaaattcctttgtcatcaaagttccagttgaagtcaaat
ggaggcccagctaataaaaagtcctgtgattttgatgaaattaagcctgtagcactgaaa
cttcaacaaaatggttctcctgggaaagacaacctacttaaaaaatcttctactttgttg
aataagagaacagcagatgaattcaaatcttcaagtcagtccttgattaaaaggacaaaa
ctggttaatggaacctcaccaagtgttagcaagcaagtatctaagaaagcagaatcaggg
gtagatgaagaagatgatgatcatgttcctatctcccaaagaatgaagaagtcacctaca
ttggggaataaattgtcttccggaaaacaaaaagtagcaaaagttgtttcatcttctttc
aaaaagacaagtaagaagtccacaaaagtagtgaagaattcaaagtactccaagtcgtca
aaggtgccccctagctctggtgaaggacaaaaatggactaccttggtccacaatggtgtc
attttccctcctgcatacaagcctcatggggtcaagatgctctataaggggaagccagtt
gatttgactcctgaacaagaggaggttggaacaatgtttgcagtgatgttagatactgat
tatatgaacaaaccaaaattcaaagagaacttcatgaatgactggagaaaaatactcggg
aaaaaccatgcaattcagaggttggaaggttgtgattttaccccaatatatgaatggcat
cagaaggagaaggagaagaagaagcaaatgagctcagaagagaagaaggccttgaaagaa
gagaaactgaagcaggaggagaagtacatgtgggctatcgttgatggtgtcaaggagaag
gttggaaactttagagttgaaccacctggtttgtttcgaggccgtggagagcacccaaag
atgggaaagttgaaaaaacgtattcaggcgggtgatattaccataaatattggaaaggat
gctccagttccagaatgccctattcctggtgaaagttggaaagaaatcaggcatgataat
acagttacatggctagctttttggaatgatccaatcaatccaaaggaattcaaatacgtg
tttttggcagctagcagttccttgaaagggcaaagtgacaaggagaaatatgagaaatca
aggctgttaaaggactatatacaaggcattagagtaacctatacgaaaaattttgcaagt
aaggatatcacaaagcagcaagtagcagttgctacttaccttattgataaactagctctc
agggcaggcaatgagaaggatgatgatgaagctgatactgttggttgctgcacattgaaa
gtagaaaatgtagagccaatacctccaaactttctgaagtttgacttccttggtaaagat
tcaattagatacctaaatcaggttgaagttgaacttcccgtgttcaaggcaattcagcag
ttcagaactggaaaaagtggtggtgatgatctctttgataaactggataccagtaaactc
aatgctcatttgaaggaacttatgcccggtcttacagcaaaagtcttccgtacgtacaat
gcatctatcaccttggatgagatgttgaatagggaaactaggggtggagattttgctgag
aaagtagttgtttatcagcatgccaataaggaggttgctatcatctgtaaccatcaacgc
accgtctcaaaatctcattctgcacaaatgttgaagttgaacgaaaagattgaagagtta
aagggcattttggatgggttaaaaaaagatttggctcgtgtgaagaaagggaagccccca
ctgaagagtgctgatggaaagacaaagaagaacatgaaccctgaagcgttggagaggaag
attgctcagaccactacaaagattgagaagatggagcgtgacaaggaaacaaaagaagat
ttgaaaacggtggcattgggtacgtcaaagatcaactaccttgatcctaggatcacagtt
gcttggtgcaagcgacaagaagttcctatcgagaagattttcaacaagtccctactagca
aagtttgcttgggcaatggacgtcgatcccagcttcagattctga
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