Diospyros lotus (date-plum): 127812238
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Entry
127812238 CDS
T10632
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127812238
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127812238
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dlt01009
]
127812238
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127812238
03036 Chromosome and associated proteins [BR:
dlt03036
]
127812238
Protein phosphatases and associated proteins [BR:
dlt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127812238
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127812238
SWI/SNF complex
127812238
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127812238
PBAF complex
127812238
SWI/SNF complex
127812238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
127812238
NCBI-ProteinID:
XP_052208581
LinkDB
All DBs
Position
10:27833942..27839863
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AA seq
279 aa
AA seq
DB search
MFVKCNPKPRRKIQIQRIRRLNWSRRKSAIWKTMKNLSVPSASSRNPVKFRIPTAENLVP
IRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFR
SFEGQDMTTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTFCKDLGVDDPEV
GPAVAVAIREQLYEIAMQSVASAKETRINKKGRRGAEHFPASASKVGGSALDLMKLFGNR
ASAIRKRREWDVYEPIVDLLSNEEVDALEAREEQRNARA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaagtgcaaccctaaaccgcgaaggaaaatccaaatccagagaatccggcga
ttaaattggagcagacggaaatcggcgatctggaaaaccatgaaaaacctctcggtacca
tcagcttcctctaggaatcccgttaagttcaggattccaacggccgagaacctggttcca
atccgtctggatatcgagatcgatggtcagaggttcagagatgcgttcacgtggaatccc
tctgatccagattcagaggtggtggtatttgcgaaaaggactgttaaagacttgaagctt
cctccagcatttgttacacagattgctcaatccattcaatcacagctgacagaatttcga
tcatttgagggacaggatatgaccactggtgagaagattgtgcccatcaagcttgatctt
cgagtaaatcatacgctgataaaagaccagtttttgtgggacttgaacaactttgagagt
gatccagaagaatttgcaagaaccttctgcaaagatttgggtgttgacgatcctgaagtt
ggacctgcagttgctgtcgcgatcagagaacaactatatgagattgcaatgcaaagtgta
gcttcagcaaaggaaaccagaataaacaagaagggccgcagaggggccgaacatttccct
gccagtgccagtaaggttggtggaagtgcattagatttgatgaagttgtttggtaacaga
gcgagtgccatccggaagagaagggagtgggatgtgtacgaacccattgttgatcttctg
tcgaatgaggaagtagatgccctcgaggcaagggaggagcagaggaatgctcgggcatag
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