Diospyros lotus (date-plum): 127812880
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Entry
127812880 CDS
T10632
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127812880
Membrane trafficking [BR:
dlt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127812880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
127812880
NCBI-ProteinID:
XP_052209379
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All DBs
Position
11:complement(17906374..17942635)
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AA seq
1471 aa
AA seq
DB search
MASTPPFQVEDQTDEDFFDKLVDDDDEFKASASSSGHNFADGNDSDEVKAFANLSTGEAD
GRSEGVGGEGQNETNKGEGTLHKVNPVSVDGHTDESSSVVSSNSCPVDGHFEESNSLVSS
NSFAFDNVIEPNGMATETKDTPDPTIDKVNESVGSGVKEVQWTAFNTDSGHNDSNGFGSY
SDFFSELGDGAIHQTGKVDDSISMQPKIGSDSAELTTANVDNKHNYMEYQENQSFAATMG
QNDGQDLNNTLYWENLYPGWKYDTSTGQWYQIDGFGTAGNVQGTFNSTTAGDSAVSDGNS
QVSYLQQTAQSSEGTISESGTMGSVTNLNQLSHESRVTGSSTYWNQVPQCSSVTEGVSSW
SQVSQQNEYPAHMVFDPQYPGWYYDTISQEWRSLDTYTSLAQSAIEAHNQLSQNSFASMG
ACSQSDDKKSFNDYGLVEHYGSHDFGAQSPDYNWAGSVSNYNQQPLNMLQAESVAKNEAP
TDFSGNQQLETDHGSNFSTSTLVNQQKSYVSRGIAPAYETATQPHNEFASDSHGFVSSAN
FTQHIGQAIMQQNEQMHVSSNYYGNQNSANFSQQQFQSSPKLTSTAGRSSAGRPPHALVT
FGFGGKLIVVKDHSSLSTSSYGSQGHVGGSISVLNLMELVTQKFEASSTGVGNCDYFDTL
CRQSFPGPLVGGNVGSKELNKWIDERIVNCEFPAVDYRKGEVLRLLLSLLKIACQYYGKL
RSPIGTDTALKESDVPESAVAKLFASVKRDSAQFSDYGALAHCLQKLPSEGQMQATAAEV
QSLLVSGRKKEALHRASEGQLWGPALVLAAQLGDQFYVDTTKKMALHQLVAGSPLRTLCL
LIAGQPAEVFSSEASDSSFPGALNMSAQPAQDGSNFMLADWEENLAVITANRTKDDELVL
IHLGDCLWKDRSEIVAAHICYLVAEANFEPYSDTARLCLIGADHWKFPRTYVTPEAIQRT
ELFEYSKVLGNPQFTLLPFQPYKLIYAHMLAEVGKVTESLKYCQAVFKSLKNGRTPEVDT
LRQLVSSLEERIRTHQQGGYSTNLAPGKLVGKLLNLFDSTAHRVVGGLPPPVPSASQGSV
QANALHHEPMGPRVSASQSTMAMSSLMPSASVEPISELRVDGNRMTIHNRSISEPDIGRT
PRQMQDQVDSSKEATSSNAQGKASASAGASRFGRFNFGSQLLQKTMGLVSKPWQDRQAKL
GEKNKFYYDEKLKRWVEEGAEPPAEEAALPPPPTSAALQNGTSDYNLRGALKSENSPSSG
SPEFTSPSPPEQSSGIPPIPPVQNQFSARGRAGVRSRYVDTFNKGGGNPTNLFQSSLVPP
VKPAASGANPKFFVPTPVSSSQQSSDSMASSTPEPAAFNQNLSNLSNSSDSPASLSSMST
LSRYPSMDNISNKETKANPSAPLPAHSRRTASWSGSFNVDNISPQQTEAKPLGEVMGIPP
SLFVPSEPSFPPLANSGGGSGSGEDLHEVEL
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactcctccattccaggtggaggatcaaacggatgaggatttctttgacaaa
ttagttgatgacgatgacgagtttaaggcctcggcgtcgtcatccgggcataattttgcc
gacgggaatgattcagatgaagtcaaggcatttgcaaatttgagtacaggtgaggctgac
ggcaggtctgaaggtgtaggcggggaagggcagaatgaaactaataagggcgaaggcact
ctccataaagttaatcccgtgtcggtggatgggcatacggatgagagtagttcagtggta
tcatccaattcatgtccggtggatggccattttgaagagagtaattcactagtttcatcc
aattcttttgcatttgataatgtcatcgaacccaatggcatggcaacagagacaaaggat
actccagatccaacgattgacaaagttaatgaatctgtaggctcaggtgttaaggaggtg
caatggaccgcatttaacactgattcaggacataatgatagcaatgggtttggatcgtac
tctgattttttcagcgagttaggagatggtgctattcatcaaactgggaaggttgatgat
agcatcagtatgcaaccgaagattggatctgacagtgcagaacttactactgcaaatgtt
gacaacaaacataactatatggaatatcaagagaatcaatcttttgctgccactatggga
caaaatgatggtcaggatctaaataatactctatactgggagaatctgtatccagggtgg
aagtatgacacaagtactggtcaatggtaccaaattgatggttttgggactgcagggaat
gtgcaggggaccttcaactccactacggctggtgattcagctgtttctgatgggaactca
caggtttcttacttgcagcaaactgctcagtcttctgagggtactatatctgagagtggc
accatgggaagcgtcacgaacttgaatcagttgtcacatgagagtcgtgtgactggcagc
agtacttactggaaccaggtgccacaatgtagcagtgttactgaaggtgtttctagttgg
agtcaggtttcacagcagaatgagtacccagcacacatggtttttgacccacaataccca
ggttggtattatgatacaatttcccaagaatggcgatcattagatacctatacctcactt
gctcaatcagcaattgaagcacataatcaactaagtcaaaatagttttgcatcaatgggt
gcatgttcccagagtgacgataaaaaatctttcaatgactacggactagtggagcattac
gggtctcatgattttggtgcccaaagcccagattacaactgggctggctctgtcagtaat
tacaatcagcaacccctgaatatgttgcaagctgagagtgtcgccaagaatgaggctccc
acagattttagtggaaaccagcagttggagactgatcatggttcaaatttttccactagc
acccttgtcaatcaacaaaagtcttatgtttccaggggaatagctccagcttatgagaca
gcaactcagcctcataatgaatttgcatctgattcacatggttttgtttctagtgcaaac
ttcacccagcacattggtcaggcaattatgcagcagaatgagcaaatgcatgtctccagc
aattattatggcaatcaaaattcagcaaatttttcacagcaacagtttcaaagcagccct
aaacttacatccaccgcaggaaggtcgtctgcaggccgccctccacatgctctggttaca
tttgggtttggcggaaaactcattgtggtgaaagatcatagttctctaagtacctcatcc
tatgggagccagggtcatgtaggaggctcaatctctgttcttaatttgatggaacttgtc
actcagaaatttgaagcatcaagcactggtgtgggcaattgtgattattttgacacactg
tgtaggcaatcttttcctggtcccttggttggagggaatgttgggagtaaagagttgaac
aagtggattgatgaaaggattgtgaattgtgaatttcctgctgttgactacaggaaaggt
gaagttttaaggttgcttctctcattgcttaagatagcttgtcagtattatggaaaactt
cgatctccgattggcactgacactgcattaaaggaaagtgatgttccagagtcagcagtt
gctaaactttttgcatctgtaaagagggatagtgcacagttcagtgactatggtgctctg
gcccactgcttgcagaagttgccatctgagggacaaatgcaggcaactgctgctgaggta
caaagtcttttggtttctggtagaaagaaggaggctttacatagagcaagcgaaggccag
ctgtggggacctgcacttgtactagctgctcaacttggtgaccagttttatgttgatact
acaaagaaaatggcacttcaccaactagtagcaggctcaccattacgaacattatgcctg
ctgattgcaggtcaaccagcagaggtgttttctagtgaggcatctgatagcagcttccct
ggtgctctgaatatgtctgcacagcctgcacaggatggctcaaactttatgttagccgat
tgggaagagaatttggcagtaataactgctaatagaacaaaagatgatgaactcgtgctt
attcatcttggagattgcttgtggaaagatagaagtgaaattgttgctgcacacatttgc
tacttagttgcagaggcaaactttgagccatattcagacactgcaagattgtgtctaatt
ggcgcagatcactggaaattcccccgaacatatgtgactccagaggctattcagaggaca
gagttatttgaatattctaaggtgcttgggaatcctcagtttaccctgctaccatttcag
ccgtataagcttatatatgcacacatgcttgcagaagtgggaaaagtgacagaatcgctc
aagtactgtcaagcagtatttaaatctctgaaaaatggccgcacacctgaagtggataca
ttgagacaattagtgtcatctcttgaggaaagaatacgaactcatcaacagggcggatac
tcaacaaacttggctccaggaaaactagtgggcaaattgcttaacctttttgacagtact
gctcatcgtgttgttggaggcctacccccacctgtaccatcagcatcacagggaagcgta
caggctaatgcacttcatcatgaacccatggggcctagggtatcagctagccaatcaacc
atggcaatgtcatcactaatgccttcagcatcagtagagcccataagtgaattgagggtt
gatggcaatagaatgacaattcataacagaagcatttcggagccagatattggaagaact
ccacgacagatgcaggatcaggtagattcatcaaaagaagcaacctcatccaatgcacag
ggcaaagcttcagcctcagctggggcatcccgatttggtcgattcaattttgggtcacag
cttttgcagaagactatgggtttagtctcaaagccctggcaggatcgacaggcaaagttg
ggtgaaaaaaataaattctattatgatgaaaaactcaagagatgggtagaggaaggggct
gaacctcctgctgaagaagctgccttgccacctccacccacatctgcggcactccaaaat
ggaacatcagactacaacttgagaggtgcattgaaaagtgaaaattctcctagtagtgga
agcccagaatttacaagccctagtcctccagaacaaagttcaggaattccacctattcca
cctgtgcaaaaccaattttctgctcgtggaagggcaggtgtccgttctaggtatgttgac
acctttaacaaaggtggtggtaatccaacaaatttgttccagtcatctttggttccaccc
gttaaacccgctgctagtggtgccaatccaaaattttttgttcccacgccggtatcctca
agtcaacagagttctgattctatggcatctagtacgccagaacctgcagcctttaatcaa
aatttgtccaatctgagtaactcaagtgattctcctgcatctttgtcgtcaatgtctacg
ttgtcaaggtatccaagcatggacaacatctcgaacaaggagacaaaggccaacccaagt
gcccctcttccagctcattcacggcggacagcctcatggagtggaagctttaacgtcgat
aatatttccccacagcagactgaagcaaaacctcttggggaagtaatgggtattccccca
tcgttatttgtgcccagtgaaccgtctttcccacccttggcaaacagtggcggcggttct
ggctctggggaggaccttcatgaagtagaactttga
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integrated database retrieval system
