Diospyros lotus (date-plum): 127812898
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Entry
127812898 CDS
T10632
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127812898
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127812898
Membrane trafficking [BR:
dlt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127812898
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127812898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
Coatomer_g_Cpla
Alpha_adaptinC2
WxLIP_PGBD
Motif
Other DBs
NCBI-GeneID:
127812898
NCBI-ProteinID:
XP_052209409
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All DBs
Position
11:complement(32811638..32820056)
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AA seq
948 aa
AA seq
DB search
MEKSCSLLVHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR
YVLPSEDHTIQKLLLLYLEIIDKTDGKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNEVEIVEPLIPSVLANLEHRHPFIRRNAILAVMSIYKLPQGEHLLADAPEMIEKVLL
SEQDQSAKRNAFLMLFNCSQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK
GRYIKIIISLLNAPSSAVIYECASTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSAHREIMVDLIMDVLRALSSPNIDIRRKTLDIILELITPQSVNEVVLTLKKEV
VKTQSGELEKNAEFRQMLIQAIHSCAIKFPEVAGTVVHLLMDFLGDSNIASAMDVVVFVR
EIIETNPKLRVSIVTRLLDIFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGD
LPFYSATEEEESNDSSKKSQQVNAITVSSRRPAILADGTYATQSAASETALSPPTIVQGS
LASGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKVLTQALLIMVSMLQLG
QSSALSHPIDNDSNDRIVLCIRLLCNTGDEVRKIWLQSCRESFVKMLSDKLLRETEEIKA
KAQISHAQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKRATGEFVKDRDDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVFETSNVLERTVIVLNDIHIDIMDYISPAVCNDAAF
RTMWAEFEWENKVAVNTVIQDEKQFLDHIIKSTNMKCLTAPSALDGECGFLAANLYAKSV
FGEDALVNVSIEKQADGKLGGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcttgttccctgcttgttcactttgacaaaggaacgcccgccattgcaaat
gagatcaaggaagcgcttgaagggaatgacgttcccgccaaggttgatgccatgaagaaa
gcaatcatgcttctgttgaacggggaaaccctgcctcaacttttcatcactatagtaaga
tatgttttgccttctgaggaccacacaattcaaaagttgttacttctttacttggagatc
attgataaaactgatggaaaaggacgggtattaccagaaatgatcttgatatgccaaaat
ttgaggaacaatcttcagcacccaaacgagtacattcgtggtgtaacattgaggtttctc
tgtcggttgaatgaggtagagattgttgagcctttgataccttctgttttggcaaactta
gagcatcgccacccttttattagaaggaatgccattcttgcagtgatgtcaatttataag
cttccacaaggtgagcatctcttggctgatgcaccagagatgattgagaaggttcttttg
tcagagcaggatcaatcagccaagaggaatgctttcctcatgctttttaattgttctcag
gatcgggctattaattaccttttgacccacgttgatagagtgtctgaatggggtgagttg
cttcaaatggttgtattagagttgatccgtaaagtatgtagaacaaataagggagaaaaa
ggaaggtacataaagatcattatatctctgttgaatgccccttcaagtgcagttatttat
gagtgtgccagcactcttgtttctttatcatctgcccctacagctattagagctgcagct
aatacttactgtcagcttctactttctcaaagtgacaacaatgttaagcttattgtgctt
gatcgccttaatgaacttaaatctgctcatagagagattatggttgatcttataatggat
gtgcttagggcactttcaagcccaaacattgacatcaggagaaaaacacttgacataatt
cttgaattgatcactccccaaagtgtcaacgaggttgttcttactttgaagaaggaagtt
gttaagactcaaagtggggagctagagaagaatgcggaattcaggcaaatgcttattcaa
gctattcattcttgtgcaatcaagttccctgaagttgcaggcactgtggttcatttgttg
atggattttttgggagacagcaacattgcttcagctatggatgttgttgtctttgtacgg
gagataatagaaaccaacccaaaattaagggtttctattgtaacaaggttgctggatatt
ttctatcagatccgtgcagcacgggtctgctcctgtgctctttggatcattggagagtac
tgtctgtctctttcagaagttgagagtggtattgcaaccatcaaacagtgccttggagac
ttacccttttactcggccacagaagaagaggaaagtaatgactcttctaagaagtctcag
caagttaatgccataactgtttcctctagaaggcctgcaattcttgctgatgggacttat
gctactcagagtgctgcatctgaaactgccctctccccacctactattgtgcaaggatcc
ttggcttctgggaatttgcgatcccttcttctcactggtgactttttccttggggctgtt
gtggcctgcacactgacaaaacttgtcttaagactggaggaggttcaaccatcaaaagtt
gaagtgaacaaagtgttgacccaggcattactgattatggtttctatgttacaactagga
caatcttccgccctttcgcatccaattgataatgattccaatgataggattgtcctttgc
ataagattgttgtgcaacactggagatgaagtcaggaagatatggctgcagtcttgccgt
gagagttttgtgaaaatgctgtcagataaactgttaagagaaacagaggaaattaaagct
aaagctcagatttctcatgcacaaccagatgatctcattgacttctaccatttgaagagt
aggcggggtatgagccagcttgagttggaagatgaggtccaagatgatttaaaacgtgct
actggagaattcgtcaaggacagagatgatgcaaataagctaaatcgtattcttcaactc
actggatttagtgacccagtctatgctgaagcttatgtcacagttcatcattatgatatt
gtccttgatgttactgtaattaatcgaactaaggagaccctacagaatttatgtttggaa
ttggcaactatgggtgatcttaaacttgttgatcgtccacaaaactatacattggctcct
gaatcaagcaagcagataaaggctaacattaaggtgtcctcaactgagactggagttatt
tttgggaacattgtctttgaaacttcaaatgtgcttgagcggacagttattgtgctgaat
gatatccacattgacatcatggattacatctctcctgcagtttgcaatgatgcagctttc
agaacaatgtgggccgagtttgagtgggaaaacaaggttgctgtcaacactgtaattcaa
gatgagaaacaattccttgaccacattatcaaatcaaccaacatgaagtgcctcactgca
ccgtcggcactggatggtgagtgtggcttcttggctgctaatttgtatgcaaagagcgtg
tttggagaggatgctctagtaaatgttagcatcgagaaacaagcagacggaaagcttggt
gggtatattaggataaggagcaagactcaggggatagctcttagcttgggggacaagatc
actctcaagcagaagggaggcagttga
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