Diospyros lotus (date-plum): 127812900
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Entry
127812900 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127812900 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127812900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127812900
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127812900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
GTP_EFTU_D4
MMR_HSR1
Rubredoxin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
127812900
NCBI-ProteinID:
XP_052209411
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Position
11:32833826..32845385
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AA seq
724 aa
AA seq
DB search
MPHKGNYGVDVDDEYDAYEDYDYDYDYDSDVQENSVEPPETEQETLRPGVWRCPICTFDN
EETMSACDICGVLRNPLVNVRRNGNNNLVDGMCKDSGVSIMAKSLFASLPRPTPNKSVTY
QQQNDDILTEECNSFHKLGNIQGHFHELHKAFSLQKKYHFNIAPFKFDVLSPDDLVSSGL
RSSKVVSEAISQGSASSVTPSSVSKKKIAIDFPLDAKSINSSSIILSEDRHGSVAEDTRS
PVNGDEPQSLSGSLNDMSLNIKSGVSKNVNAGLSRSHAHYEPEKWMLPNQAEDKLIQLNL
AIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKESKLQGKGSFAYAWALDESAEERERG
ITMTVAVAYFDSNRYHIVLLDAPGHMDFVPNMISGATQADAAVLVIDASMGSFEAGMDST
GGQTREHAQLIRSFGVDQIIVAINKMDAVQYSRERFDTIRLQLGTFLRQLGFKNSSVSWV
PLSAIENQNLVVSASDGRLSSWYKGPSLLDAIDSLVPPARDYSKPLLMPICDVIKFQSQG
QVSACGKLEAGALRSGSKVLVMPSREIATVRSLERDSQSCTIARAGDNVAVCLQGIDGSH
VMAGGVLCHPEFPVALANHLELKILVLDCATPILVGSQLEFHVHHAKEAARVVKIISLLD
PKTGKETKKAPRCLMVKQTAIIQVALPGAVCVAESSTYKALSRVFLRASGRTVAVGLVNR
IIEQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataagggaaattacggggttgatgttgatgatgaatatgatgcctatgaagat
tatgattatgattatgattatgattctgatgtgcaagagaactcagttgagccaccagag
acagaacaggaaacattaaggcctggagtttggcgttgccccatttgtacatttgataat
gaagaaactatgtcggcatgtgatatttgtggggttcttcgtaatccattggttaatgtt
cgcagaaatggcaataataacttggttgatggcatgtgcaaagattctggagtatccata
atggccaagtctctttttgcatcattgccgcgtccaacacccaacaagtctgtaacttat
cagcagcagaatgatgatattttgacggaagagtgcaatagcttccataagcttggaaat
atccaagggcactttcatgaattacataaggcttttagcttacagaaaaagtaccatttc
aatatagcccctttcaagtttgatgtcctttctcctgatgatttggtgtcaagtggattg
cgttcctccaaagtggtgtcggaagccatttcccaaggatcagcttcttcagtcactcct
tcaagtgtcagtaaaaagaaaattgctattgatttccctttagatgctaaaagcattaat
agctcttcaataatactgtcagaagatagacatggtagtgttgcggaggatacccgttct
ccagtgaatggggatgagccacagagcctttcgggaagtctgaatgatatgtctttaaat
atcaagtctggagtatcaaagaatgttaatgctggattatctagatcacatgctcactat
gaacctgagaaatggatgctacctaaccaggcagaagataaacttatccaactaaatctt
gccattgttggtcatgttgattctgggaaatcaacactttcagggaggctattgcacctc
ttgggacggatatctcaaaagcaaatgcacaaatatgaaaaagagtctaaactacaagga
aaaggctcttttgcttatgcatgggctttggatgaaagcgctgaagaaagggaaagggga
ataactatgacagtggcagttgcatattttgactctaataggtatcacattgtgctgctg
gatgccccagggcacatggactttgtaccaaacatgatatctggggcaacccaagcagat
gctgcagttcttgttatagatgcatcgatgggttcttttgaagctggtatggacagcacc
ggagggcaaacaagggagcatgcacaacttattagaagttttggtgttgaccaaattata
gttgcaataaataaaatggatgctgtgcaatactccagggaacgctttgatacaattaga
ctgcagcttggaacatttctccgccaacttggcttcaagaattcttctgtctcatgggtc
ccattgagtgccattgaaaaccaaaatctggtggtgtctgcttctgatggacgattgtca
tcctggtataaaggaccctctctgttggatgcaatagattctcttgtacctccggctcga
gattactcaaagccactactaatgcctatatgtgatgttataaaattccaatcacaaggg
caggtatctgcatgtgggaaacttgaagctggagcacttcgaagtggatctaaggttcta
gttatgccatcaagggaaatagctactgtgcgttccttggaacgtgactcacagtcctgt
acaattgcaagagctggagacaacgtggctgtttgtcttcaagggattgacggaagtcat
gtcatggctgggggtgtgctatgtcaccctgagtttccagttgcacttgcaaaccatttg
gagctgaagattctcgtattggactgtgcaaccccgatattagttggctctcaattagag
ttccatgtccaccatgcaaaggaggctgcaagagtagtgaagataatatcattgcttgat
ccgaagacggggaaggagacaaagaaggcaccgcgatgtctgatggtaaagcagactgca
ataattcaggtggctcttcccggagcagtttgtgtggcggagtcttctacctataaagct
cttagtagggtgttcctcagagcatcgggaagaactgttgctgttggccttgtgaatcgg
ataatagagcagtaa
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