Diospyros lotus (date-plum): 127812971
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Entry
127812971 CDS
T10632
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127812971
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127812971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
RNA_helicase
AAA_19
AAA_14
Motif
Other DBs
NCBI-GeneID:
127812971
NCBI-ProteinID:
XP_052209554
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Position
11:complement(18429407..18494050)
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AA seq
793 aa
AA seq
DB search
MEDDAGERSSFVVGLIENRAKEVGVAGFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VIIVAPNKLAPDSMVGVSILVDRYFPSTKKVIMARGCFDDTKGAVLVKNLAAKELLTLGL
DTYYKQYYLCLAAASATIKWTEAEKGVIITNHSLSVTFNGSFDHMNIDATSVQNLEIIEP
FNSTLWGTRNKKRSLFQMLKTTRTVGGTRLLRANLLQPLKDIETISARLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNEVLGIDNARKSQILISSIILLKTALDAL
PLLSKVLKDANSFLLGNIYRSVCENEKYALIRKRIGEVIDEDVLHARVPFVAQTQQCFAV
KAGIDGLLDIARRSFCDISEAIHNLANKYREDFKLPNLKIPFNKRQGFYFSIPQKDIQGK
LPSKFIQVMKHGNNIHCSTLELASLNARNKSAAAECYIRTELCLEALVDAIREHVSLLNL
LSEVLCLLDMIVNSFAHTISTKPVDQCIRPQFTDNGPLAIDAGRHPILESIHNDFVPNNV
FLSETSNMIIVMGPNMCGKSTYLQQVCLIVILAQIGCYIPARFATLRMVDRIFTRMGTVD
NLESNSSTFMTEMKETAFIMQNISQRSLIVMDELGRATSSSDGFAIAWSCCEHLLALKAY
TIFATHMKNLSELATIYPNVKILHFHVETTNSRLDFKFQLKDGPRHVPHYGLLLAGVAGL
PSSVIITAKSITARITEKEEKRMEVNCQQYHDIQKVYRAAQRLICLKFSSQDEDTIREAL
QNLKDCYINGSLL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgcaggggaaagatcgagcttcgttgtcggtttgatcgagaacagagcc
aaggaggttggagtggctggctttgacttgagatcagcttcactccatctttcacaatat
attgaaactagtagttcgtatcagaacacgaagacgttgttgcatttctatgatccaatg
gttattattgttgcacctaataagctagcacctgacagtatggttggtgtctcaatactg
gtggacagatactttccatcaaccaagaaggtcattatggcccgtggttgctttgacgat
actaagggtgctgtgctggtaaaaaatttagcggccaaggaactgttaacacttggactg
gatacttactacaagcagtattatctttgcttggctgcagcttctgcaacaatcaagtgg
actgaagcagagaaaggagtcatcattacaaaccactcattgtcggttactttcaatgga
tcatttgaccacatgaatattgatgccactagtgtccagaatttggaaatcattgagcca
ttcaattcaactctttggggcacaagaaacaaaaagagaagtctgttccaaatgctgaag
acaacaagaactgttggagggactagacttctccgtgccaatcttttgcagccgctgaaa
gacattgaaactatcagtgctcgacttgattgcctggatgaattgatgagcaatgagcaa
ctgttctttggtctctcccaggttctccgtaagtttccaaaagaaactgatcgggttctt
tgtcacttctgcttcaaaccaaagaaagttacaaatgaggtcttgggcattgataatgct
aggaagagccaaattttgatttcaagcattattcttcttaaaactgctcttgatgcattg
ccattactctccaaggtactcaaggatgcaaacagttttcttcttggaaacatttacaga
tctgtatgtgaaaatgaaaaatatgcgttgataagaaaaagaataggagaggtgattgat
gaagatgttcttcatgcccgggtcccttttgttgcccagacacagcagtgctttgctgtt
aaagctggaatagatggacttcttgatattgcaaggaggtctttttgtgatatcagtgaa
gccatacacaaccttgctaacaaatatcgtgaagatttcaagcttccaaatttgaaaatc
cccttcaacaagaggcaggggttttactttagcattccacagaaggacatacaaggaaag
cttccaagcaagttcattcaggtaatgaaacatgggaacaatatccattgttcaactttg
gaacttgcttctttaaatgcaaggaacaagtctgcagctgctgaatgctatataagaaca
gaactttgcctggaagcacttgttgatgccataagggagcatgtatctctgcttaacctg
ctctctgaggttttatgccttctagatatgattgtgaattcatttgctcacacaatatcc
actaagcctgttgatcaatgcattagacctcaatttacagataatggcccgttagcaatt
gatgctggaagacaccctatcctggaaagtatacacaatgattttgttcccaacaatgtc
ttcctttctgaaacatcaaatatgataattgtcatgggcccgaacatgtgtggaaaaagt
acttatcttcaacaagtttgcttgatagtcatacttgctcagatcggttgttatatccct
gcccgctttgcaactctaaggatggttgaccgtatatttacaagaatggggactgtcgac
aatcttgagtcaaactctagcacgtttatgacagagatgaaagagacagcttttatcatg
cagaatatttcccaaaggagtctgattgtaatggatgaacttgggagggccacttcttcc
tcagatggattcgcaattgcatggagctgctgtgaacatcttttagcactcaaagcgtat
accatatttgctactcacatgaaaaacttatcagagttagctaccatttatccaaatgtc
aaaattcttcactttcatgttgagaccacaaacagtcgcttggatttcaagtttcaactc
aaggatggtccacgacatgtaccgcactatgggcttctgttagcaggagtggctgggttg
cctagttcagtcatcataacagccaaaagcatcacagcaaggataacagaaaaggaagag
aagagaatggaagtgaactgccagcagtatcatgacatccagaaggtttatcgtgccgct
caacggctcatatgcttaaaattctccagccaagacgaagacacaatccgagaagcactg
cagaacctcaaagattgctacataaatggaagcctcctctag
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