Diospyros lotus (date-plum): 127813002
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Entry
127813002 CDS
T10632
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
dlt03015
mRNA surveillance pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127813002
09122 Translation
03013 Nucleocytoplasmic transport
127813002
03015 mRNA surveillance pathway
127813002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127813002
03041 Spliceosome [BR:
dlt03041
]
127813002
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127813002
Spliceosome [BR:
dlt03041
]
Complex C
Other components
EJC/TREX
127813002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
127813002
NCBI-ProteinID:
XP_052209610
LinkDB
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Position
11:complement(627523..635170)
Genome browser
AA seq
891 aa
AA seq
DB search
MKTPSTYPVLDNRPIDQWRVTELKEELKRRKLITRGLKEDLVKRLDEALRNETESPKEDT
GIIALDGSSQVVGTGDVVTCPVVSETSGDTRDHGNNKNQLDGGTHEPHIEDTEMSLGKKR
VYEEDGTDGTGSAREEKTVVNVSSFDTNITIKDNLVSEKKADIDDAVASLGEKKVQEAEV
TGGTDSARDEDIVVNAISGENIAIEEDTVSGIAIDVKESQNSDSKNDEMDSKSLRENEEV
KLSQENVDLNSSDPNDEASEVSNITVSENVVSGTALTVNDDSQDQRGDLKSQLENEEMKI
SHEEVDLNSSDPNQVSEVSTVLGFQVKTDSISSDCVSINEKNELKDNIIDDNVKLELDVM
PEMVQPSSSNVLADGGKLHPMDVEEPHETKAPVEERDDSNAAKAEVNKKNDGADVTSSEK
LNLDRSSGEDYLEEDALENKQIDSKYNSDDVEDRSEKTSVLVVKEEAPVDIMLDDNLSDK
KYIHDENKNVAVTPPVKRKLHAASADQELVGNNEASKRQRRWNAENLKVPEPVSNIPTTT
TTTPKDSIPSTKRNFSRSNSTASEDAPKERVVPPSPKAPTNSLRIDRFLRPFTLKAVQEL
LGKTGNVTSFWMDHIKTHCYVTYSSVEEAMETRNAVYNLQWPPNGGRLLVAEFVDPQEVK
MRLDGPPPQSPATPVSTGPTVLPAPSDSQPPAAPSRQVQWQQLPPPPPLPPPPPLSNPPP
ARERPPLPPPPSEKADPPIVTLDDLFRKTKATPRIYYLPLSDEQVAAKLKAQGKSTKQSA
GVACWNGVFQAKWYRDSRRRRRFRSKDGFRFSHCQIEVSSLCDWTDLIISLSCLCISLFV
SSCSRRSDFVEPPQLFLLAFNFLMDCWLGGIASLQSALPVPVLVLVLVQVL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgccatcgacatatcccgttcttgacaatcgaccaattgatcaatggagggtg
acagaactaaaggaagagcttaagaggcggaaattgataactagggggttgaaagaagat
ctggtgaaacggttggatgaagcacttagaaatgaaactgaatctcctaaggaagatact
ggtattattgctttggatgggagttcccaagttgtggggactggagatgtagtgacatgc
ccagttgtttctgaaacaagtggggacacaagggatcatggtaataacaaaaatcagctg
gatggtggaacacatgaacctcacattgaggatactgaaatgtcgttgggtaaaaaaagg
gtttacgaggaagatggaacagatggcactggttctgctagggaggagaagacagtagtt
aatgtgagttcttttgacactaacatcacaattaaagataatttggtatctgaaaagaaa
gccgacattgatgacgctgtagcgtcattgggtgaaaagaaagttcaagaggcagaagta
acaggtggtactgattctgctagggatgaggatatagtagttaacgcaatttctggtgaa
aacattgcaatagaggaggatacagtatctggaatagctatagatgtgaaagagtctcag
aacagtgactcaaaaaatgacgagatggattcaaaatccctgcgggagaatgaggaggta
aagcttagtcaagaaaatgttgacctcaactcttctgatccaaatgatgaggcatctgag
gttagcaatatcacagtaagtgagaatgtggtatctggaacagcattgactgtgaatgac
gactcccaagaccagaggggggatttgaaatcccagttggagaatgaggaaatgaagatc
tcccatgaggaagtcgatctcaactcttctgatccaaaccaggtatccgaggtcagcact
gttttagggtttcaagtaaaaactgattctatttctagtgattgtgtctcaattaatgaa
aagaatgaactaaaggataatataattgatgataatgtcaaattagaattagatgttatg
cctgagatggtgcagccatcatcaagcaatgtgctcgcagatggtggcaaactacatcca
atggatgttgaagagccacatgagaccaaggcacctgtcgaggagagagatgacagcaat
gctgctaaagcggaggtgaacaagaaaaatgatggtgcagatgtaacttcttcagaaaag
ttaaatttggaccgaagttctggtgaagattacttggaggaagatgcactggagaataaa
caaatagattctaagtataactcagatgatgtggaagataggagtgagaaaacttcagtt
cttgtggtgaaggaggaagctcctgtcgatattatgctggatgataatctttcagacaag
aaatacattcatgatgaaaataagaatgttgcagttacaccccctgtgaaaaggaagctt
catgctgcttctgcagatcaagaactagttggtaacaatgaggcttccaagagacaaagg
aggtggaatgctgaaaaccttaaagttcctgaacctgtaagcaacattcccactactact
actactactcctaaggacagtatcccatctactaagcgcaacttctctagatccaattct
acagctagtgaagatgctccaaaagaacgtgtggttccaccatcaccaaaggctcctact
aattctttaagaattgatcgctttctgcgtccatttacactaaaagctgtgcaagaactt
ctggggaaaactgggaatgtcactagtttctggatggaccacatcaaaacccactgctat
gtcacttattcttctgttgaagaagccatggagactcggaatgctgtatataacttgcaa
tggcctccaaatgggggacgccttcttgtagctgagtttgttgacccccaggaagtgaaa
atgcgactggatggtcctcctcctcaatcacctgcaacaccagtcagtactgggccaact
gtgcttcctgctccatctgactcgcagcccccagctgcccctagccgacaggtccagtgg
cagcaactcccacctccaccacctctcccgcctccgccgcctctgtcaaacccccctcca
gcaagggaacgaccccctctcccaccgccgcctagtgagaaagccgacccaccaatcgtc
actttggacgacctctttaggaaaactaaagcgacccctcgaatctactacttaccattg
tctgatgaacaagtggcagcgaagctaaaggcacagggaaaaagcaccaagcagtctgca
ggtgttgcttgttggaatggagtgttccaggcaaagtggtacagggatagcaggaggagg
aggaggttcaggtccaaggatgggtttaggttttctcactgccaaatagaggtttcttcc
ctttgtgattggacggatttgattatatctctgtcttgtctgtgtatctctctctttgtt
tcctcctgtagccggaggtctgactttgttgaacctcctcaactctttctgttagcattt
aacttcttaatggattgttggcttggtggtattgcatctttacaatcggctctgccagtg
ccagtgctagtgctagtgttagtgcaagtcctgtag
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