Diospyros lotus (date-plum): 127813295
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Entry
127813295 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127813295
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dlt01009
]
127813295
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127813295
Protein phosphatases and associated proteins [BR:
dlt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127813295
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127813295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127813295
NCBI-ProteinID:
XP_052210156
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All DBs
Position
11:complement(1837599..1876547)
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AA seq
200 aa
AA seq
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MPYPRERRSVSPPYSRSPVRDRRSRSLSRSRRSRSRSHDSDAAANPGNNLYVTGLSTRVN
ASELEKYFSGEGKVVECHLVTDPRTKESRGFAFVTMETNEDAERCIKYLNRSVLEGRLIT
VEKAKRKRGRTPTPGRYQGLKDRRGTYEGRDRRRSRSYSPRRRYDRDPYSRDRRGRSPSP
YRRRRERSLSAGGSGYTKAY
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacccaagagaaagaaggtctgtgtcaccaccctattccaggtcacctgttagg
gatcgtcgatcaagatcattgtcaaggtcaaggaggagtcgttcaaggagtcatgattca
gatgctgctgctaatcctggaaataacttgtatgtgactggtttatctactagggttaat
gccagtgaacttgagaagtatttcagtggtgaaggaaaggttgttgagtgccatctggtt
acagatcctcgcactaaagaatctcgtgggtttgcttttgttactatggaaacaaatgag
gatgcagagcgctgtattaagtatttaaatcgttctgtgctagaaggacgattaataact
gtggaaaaggccaaaaggaaacgtgggagaacaccaactcctggaaggtaccagggtctg
aaagataggcgaggtacatacgaaggacgtgatcggagaaggtctcgtagctactcaccc
cgccggaggtatgacagagatccttattccagggaccgccggggaagatcaccctcccca
tatagaaggcgcagggaacgttccttgtcagcggggggcagtggctacaccaaagcttac
taa
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