Diospyros lotus (date-plum): 127813381
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Entry
127813381 CDS
T10632
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127813381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127813381
03036 Chromosome and associated proteins [BR:
dlt03036
]
127813381
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127813381
Coactivators
SAGA/TFTC/STAGA complex
127813381
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127813381
STAGA complex
127813381
TFTC complex
127813381
SAGA complex
127813381
SLIK complex
127813381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Tricorn_2nd
LisH_PAC1
PALB2_WD40
WD_LRWD1
LisH
Dimer_MINDY4_N
Motif
Other DBs
NCBI-GeneID:
127813381
NCBI-ProteinID:
XP_052210285
LinkDB
All DBs
Position
11:complement(31479227..31497676)
Genome browser
AA seq
675 aa
AA seq
DB search
MDEEDVEKAVIAYLKKKGFKQTELAFQEEQQQHSKNSSSNNSSANSQTDPDVVKPLLFFT
ESENIPAQYHDGYSKLRSWAYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARTFFN
SFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQYLHKSQ
SITMLGIINEHINFQVSPGQSSSISDDAEVVTLVGNGQDAANLINQKEIHWGLLEDSLED
RLEKAGGLLSDLEKVDGESKEGDLDDSKKRAADGGKQGATLKKLKKDKVVGTTGKAARSE
GNIVAAAPRVKPELTLPVIPADVEHSIIQDLRNRVQLSSSALPSVSFYTFINTHNSLNCS
SISHDGSLVAGGFSDSSLKVWDMAKLGQQNDSSVLQGENDSTRSEHVRGINGQKRSYTLF
RGHSGPVYSATFSPFGDFLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFNPMGHY
FASASHDRTARVWSMDRIHPLRIMAGHLSDVDCVQWHMNCNYIATGSSDKTVRLWDVRKG
DCSRIFIGHRSSVLSLATSPDGRYMASGDEDGTIMMWDLSTGRCVTPLMGHTSCVWTLAF
SCEGSLLASGSADCTVKLWDVTASTKVLKTDDNKAGNTNRLRSLKTLPTKSTPVYTLQFS
RRNLLFAAGALSKGA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagatgtagagaaagcagtgatagcgtatttgaagaagaagggtttcaag
cagacggagcttgcgttccaagaagagcagcaacaacacagcaagaactcgtcctccaac
aactcctccgccaactctcaaaccgatcccgacgtcgtcaaacctcttctcttcttcacc
gaatcagagaatattccagcacagtaccatgatggatacagtaagcttaggtcatgggcg
tatagttcactggatttgtacaagcatgagttgcttcgtgttctctatccagtatttatc
cattgttttatggatcttgtggcaaaaggtcatattcaagaagccaggacttttttcaat
agctttcgtgaagaccatgagatgatgcacttaagggacctccagaaattggaaggtgtt
ctttctccctcacatctggaggaaatggagtttgcccattctttgaggcagagcaaagtg
aatataaagatatgccagtactcttatgagcttctgctgcaatatttacacaagagtcaa
tccattacaatgcttggaattattaatgagcatattaactttcaagtttctcctggacag
tctagctctatttccgatgatgctgaagttgttacacttgttggtaacggccaggatgct
gctaatctaatcaatcagaaagaaatacactgggggttgcttgaagactctttagaagac
aggttagagaaggcaggaggtttgctttcagatttggagaaagtagatggagaaagtaag
gaaggtgacttggatgacagtaagaaaagagcagcagatggagggaagcaaggtgctact
ctcaaaaagttgaagaaggacaaagttgttggtacaacagggaaagctgctcgtagtgag
ggaaatattgtggctgcagcaccacgtgtgaaaccagaacttactttgccagtaatacca
gcagatgtagagcattctattattcaagacctaagaaaccgtgtacagttaagcagcagt
gccctgccttcagtcagcttctacacatttattaacacgcataatagcttaaactgttca
tcaatatctcatgatggatcactggttgctggtggattctcagactcgtcactgaaggtt
tgggacatggcaaagctcggacaacagaatgacagttctgttttgcagggtgagaatgat
tcaacacggagtgaacatgtgcgtgggataaatggccagaaaagatcctatacgttattc
aggggtcactcgggacctgtatactcagctacttttagtccttttggggattttctccta
tcctcttcatcagactcaacgatacgattatggagcacaaaattaaatgcaaatctcgtt
tgctacaagggtcataattatcctgtatgggatgttcagtttaacccaatggggcattat
tttgccagtgcttcacatgaccgaacagcaagggtttggtctatggatagaatacaccct
ttgagaataatggcagggcacttgtcggatgtggattgtgtacagtggcatatgaattgc
aactacattgctacaggatctagtgacaaaacagttagattgtgggatgtacggaagggg
gactgttctagaatattcattggtcacaggagtagtgttttatctttggcaacgtcacct
gatggtcgctacatggcgtctggtgatgaagatggcacaatcatgatgtgggatctttca
actggtcgttgtgtgactcctttgatgggtcacacctcctgcgtatggacacttgctttt
agttgtgaaggttcgcttcttgcatctgggtctgctgattgcactgtaaaattatgggac
gtcacagcaagtacaaaggtgctgaaaacagatgacaacaaagctggaaatacaaacaga
ctgagatcgctgaagactctgcctaccaagtccactccggtctatactttgcagttttct
cgaaggaatcttttatttgctgctggcgctctctcaaaaggtgcttga
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