Diospyros lotus (date-plum): 127813409
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Entry
127813409 CDS
T10632
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127813409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dlt02000
]
127813409
04147 Exosome [BR:
dlt04147
]
127813409
04090 CD molecules [BR:
dlt04090
]
127813409
Enzymes [BR:
dlt01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127813409
Transporters [BR:
dlt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127813409
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127813409
CD molecules [BR:
dlt04090
]
Proteins
127813409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_21
RsgA_GTPase
AAA_15
AAA_23
DUF815
AAA_19
nSTAND1
APS_kinase
Motif
Other DBs
NCBI-GeneID:
127813409
NCBI-ProteinID:
XP_052210326
LinkDB
All DBs
Position
11:23907877..23923534
Genome browser
AA seq
1245 aa
AA seq
DB search
MSTENPVVGDHGPKTKENMTKSVPLLKLFSFADSYDYLLMLVGSLGACVHGASVPVFFIF
FGKLINVIGMAYLFPAAASHKVAKYSLDFLYLSAVILFSSWTEVACWMHTGERQAAKMRM
AYLRSMLNQDITLFDTEASTGEVIAAITSDIIVVQDAISEKVGNFLHYISRFIAGFTIGF
LRVWQISLVTLSIVPLIALAGGVYAFVTTGLISKVRKSYVKAGEIAQEVIGNVRTVQAFA
GEERAVRSYRTALLKTYKYGRKAGLARGLGLGTLHCVLFLSWSLLVWFTSIVVHKNIANG
GESFTTMLNVVIAGLSLGQAAPDISAFVRAKAAAYPIFEMIERNTISRASSKTGRKLGKL
EGHIQFKDVCFSYPSRPEVMIFNKLSLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLS
GSILLDGTDIRELDLKWLRQQIGLVNQEPALFATTIRENILYGKEDATFEEITRAAKLSE
AITFVNNLPDRFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKS
VQQALDRVMVGRTTVIVAHRLSTIRNADTIAVVQNGKIIETGSHDELILKPNGAYASLAQ
LQEAASLHRLPSQGPTLGRQVSVKYSRELSRTTSHGASFHSDKLSVGRIGADGVETVVPP
PQVSSGRLYSMLVPDWSYGVLGTICAFIAGTQMPLFALGVTQALVSFYMDWDTTRHEVKK
VSLLFCGGAAITVIVHAIAHLCFGIVGERLTLRVREMMFSAMLKNEIGWFDEAGNISSML
ASRLESDATLLRSMVVDRSTILLQNLSLVVTSFVIAFILNWRLTLVVLATYPLIISGHFS
EKMFMKGYGGNLSKAYLRANMLAGESVSNIRTIAAFCSEEKVLDLYARELVGPSKRSFTR
GQIAGIFYGVSQFFIFSSYALALWYGSVLMGKEIASFKSVMKSFMVLIVTALAMGETLAM
APDLLKGNQMVASIFEVLDRETEIRSDIGEEVTSVDGRIELRGVRFSYPSRPEVPIFKDF
SLRVRPGQSMALVGQSGSGKSSVLALVLRFYDPTSGKVTIDGKDIKKLKLKSLRKHIGLV
QQEPALFATSIYDNILYGKQEATEVEVLEAAKQANAHGFISALPNGYLTRVGERGVQLSG
GQKQRIAIARAILKNPAILLLDEATSALDMESERVVQQALDRLMKHRTSVVVAHRLSTIR
NADQIAVLQDGRIVDQGTHSGLVENKDGAYFKLISLQQQQQHDQQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaatccagtcgtcggcgaccatggtccgaagaccaaagagaacatgacc
aagtcagttccgttgcttaagctcttctcttttgccgactcctacgactacttgctcatg
ctcgtcggatcactcggcgcctgcgttcacggcgcctccgtgcccgtcttcttcattttc
ttcggcaagttgatcaacgtcatcggcatggcttatctcttccccgccgctgcttcccac
aaagtagccaagtactcattggattttttatatctcagtgcggttatactattttcatca
tggaccgaggtggcgtgttggatgcatactggggagaggcaagcggcgaagatgagaatg
gcgtatctccggtcgatgctgaatcaagacatcacgctcttcgacaccgaggcttcaacc
ggggaagtgattgctgcgattaccagtgacatcatcgtcgttcaagacgccatttctgag
aaggtgggaaacttcctgcactatatcagtcgatttatagcaggtttcacaataggcttc
ttgagggtgtggcagatcagtctcgtgactctttccatcgtacctttaattgctcttgct
ggtggtgtctatgcttttgtaaccactggccttatttccaaagtccgaaaatcatatgtc
aaggccggagaaattgctcaggaggtgattggaaatgtgagaacagtccaagcgtttgcg
ggagaggaaagggcagtgagatcatacagaacagcactcctgaaaacgtataagtatggc
aggaaagcaggactagccaggggactcggactaggcaccctgcactgtgtcctttttctt
tcgtggtcgttgcttgtttggttcactagcattgtcgtccacaagaacattgccaatgga
ggagagtctttcactaccatgctcaatgttgttatagctggactgtcactaggacaggca
gcaccagacatttccgctttcgtccgggcaaaagcagctgcttatcccatatttgaaatg
atagagagaaatacaataagcagagccagctcaaaaactggcaggaaactgggaaaactg
gaaggccatatacagttcaaggacgtatgttttagctacccatctcggcctgaagttatg
atattcaacaagttgtctctcgatataccttctgggaagattgtagcccttgtgggaggg
agcggttcgggaaaaagcacggttatatctttgattgagcgcttctatgagcccctctca
ggaagcatactattggatggaactgatatcagggagcttgatctcaagtggctaaggcaa
cagattgggctagttaatcaagagcctgctcttttcgccaccaccataagggagaacatc
ctctacggtaaggaagatgccacattcgaagagattacccgggcggcaaaactttcagag
gccatcactttcgtcaacaaccttcctgatagatttgaaactcaggtgggggaaagggga
atacaactatccgggggacagaaacaaaggattgcaatatcacgtgcaatagtaaaaaat
ccttctattcttctgctggatgaagctacaagtgcacttgatgcagagtctgagaagagc
gtgcagcaggcactagaccgtgtgatggtggggaggacaactgtaattgtggcacatcga
ctatctaccattagaaatgcagatacaattgcagttgttcagaacgggaagataattgaa
acaggaagtcatgatgagctcattttgaaaccaaatggtgcctatgcatcgcttgctcaa
ctccaagaagcagcttccttgcatcgtcttccttcacaaggtccaactttgggaaggcaa
gtaagcgtcaagtattctcgtgaattgtcacgaaccacaagccatggggcaagttttcac
tccgataaattatctgttggccgaattggagctgatggagtagagactgttgtcccgcca
cctcaagtgtctagtggcagactgtattccatgctggtccctgactggtcatacggggtt
cttggcacaatttgtgcatttatcgctggaacacagatgcctctttttgctctcggtgtc
actcaggctcttgtgtctttttacatggactgggacacaacacgccacgaagtcaagaag
gtttcactcctcttctgtggtggtgctgcaataactgttattgttcatgccattgcacac
ctttgttttggaatcgttggagagcggcttactcttcgtgtgcgagaaatgatgttttct
gcaatgctaaagaacgagattggatggtttgatgaggctggcaacataagttccatgctt
gcatcccgtttagagagtgatgcaactttactgcgaagtatggttgttgatcgctctaca
attctgctacaaaatcttagtttggttgttacttcctttgtcattgctttcatcttgaac
tggaggctcactcttgttgtcctggccacgtatcccttgatcatcagcggtcatttcagc
gagaaaatgttcatgaaaggctatggtggcaacttgagtaaggcctatctcagagctaac
atgcttgctggtgaatccgtgagtaacatccgcacaattgctgcattctgttccgaagag
aaggtccttgacctttatgctcgagaacttgttgggccttcaaaacgttcatttactcgt
ggtcagattgctggcatattctatggagtctctcagttcttcatcttctcatcctatgcc
cttgctttatggtatggttcagttctgatgggaaaggagattgcaagctttaaatcggtc
atgaaatcgttcatggttttgattgtgacagcgttggcgatgggtgagactctggcaatg
gctccagacctcctaaaggggaaccaaatggtggcatcaatctttgaggtgcttgaccga
gagacagagataagaagtgatatcggagaggaggtaacaagtgttgacggtcgaatcgag
ctgagaggtgtccggtttagctacccttcgaggcctgaggtaccaattttcaaggacttc
agcttacgagttcgtccaggacagagcatggcattagtcgggcagagtggctccggcaaa
agctcagtcctcgcccttgtactacgattttacgatccaacttccgggaaagtgacgatt
gatgggaaagatatcaagaaactgaagctgaaatctctcaggaagcacatcggcctagtc
caacaagagccggcattgttcgccacatccatctacgacaacatcctatacgggaaacaa
gaagccacagaagttgaagtcctcgaggcagccaaacaagccaatgcgcacggttttatc
agcgccctgcccaatggctacttgaccagagttggcgagcgaggagtgcagctgtctggc
ggccagaagcagaggatcgccatagcgcgagccattctcaaaaacccagcaatcttgctg
ctggacgaagccaccagcgcgttggacatggagtcagagcgggtcgtgcaacaggccctc
gacaggttgatgaagcaccggacgtcagtcgtggtggctcaccggctctccaccatcaga
aatgcagaccagatagcggttttacaggacggccggatcgtcgaccaagggactcattct
ggccttgtagagaacaaagatggggcatacttcaagttaatcagcttgcagcagcagcaa
caacacgatcaacaatag
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integrated database retrieval system
