Diospyros lotus (date-plum): 127813578
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Entry
127813578 CDS
T10632
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03030
DNA replication
dlt03420
Nucleotide excision repair
dlt03430
Mismatch repair
dlt03440
Homologous recombination
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127813578
03420 Nucleotide excision repair
127813578
03430 Mismatch repair
127813578
03440 Homologous recombination
127813578
03460 Fanconi anemia pathway
127813578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dlt03000
]
127813578
03032 DNA replication proteins [BR:
dlt03032
]
127813578
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127813578
Transcription factors [BR:
dlt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127813578
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127813578
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127813578
MMR (mismatch excision repair)
127813578
DSBR (double strand breaks repair)
HR (homologous recombination)
127813578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
127813578
NCBI-ProteinID:
XP_052210578
LinkDB
All DBs
Position
11:complement(26770505..26775739)
Genome browser
AA seq
835 aa
AA seq
DB search
MAINLTEGAIAMLSSGDGQAGDVKPVLQVADLRLVNTQNQTNERYRILLSDGVHLQQGML
ATQKNELVRSHALQKGSIVQLTQFVCNVIQGRMIIIIIDLNVILERCDPIGEPRQFERPS
TGTATPVARSSAQMQSTADQSGSSICNQPSYVGSSLGGSVAKPNVLGGSVNNPDQGRYNG
PNAHHMYIKPEIGAGVSRAPFNSYVRPQQAAYQQPPPMYTNRGPVAKNEAPPRIIPIAAL
NPYQGRWTIKARVTAKGELRHYSNPRGEGKVFSFDLLDSDGGEIRVTCFNTVADQFYNQI
EAGKIYLISKGSLKPAQKAFNHLRNDHEILLDSTSTVQPCPEDDNSIPRQQFHFHPIIDI
EGMENNSIVDVIGVVSFISPSTSIMRKNGTETQRRVLQLKDMSGRSVELTLWGQFCNAEG
LEMQKMCDSGVFPVVAVKSGRVSDFNGKAVGTISSSQLIIEPDFPEAQRLKEWFQNEGRN
TPSVSISREIMTIGRTDVRKTISQIKDDKLGTSEKPDWITVSATISFIKVDNFCYTACPI
MVGDRQCNKKVTNNGDGKWRCDRCDQSVDECDYRYILQFQIQDHTGLSWVTAFQECGEDI
MGVSAKDLYYLKHEEQDDEKFGEIVRKVLFTKYVFKLKVKEEMFSDEQRVKSTVVKAEKI
NFLSESRFLLDLMDKLKGENNASSLGPKTEDVFLSTGVKNTGSGTFGARQPPPSAGLPTN
QTSQYGNQYNGSRFTASGSSGSYLSCNSCGGTGHSSSNCPSVMTGQGHSYGSGFATKTSP
GAGMAGASSECFKCHQFGHWARDCPGLSNVPPAYGNSNVTPGRYGGVAKQRVGGF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaatctgacggaaggcgcgatagcgatgctgtcgagcggggacgggcaggcc
ggcgacgtcaagccggtcctccaagtggcggacctccgtctggtgaacactcagaaccag
acgaacgagaggtaccggattctgctctccgacggcgtccatctccagcagggcatgctc
gccacccagaagaacgaactcgttcgctcccacgctctccagaagggctccatcgttcag
ttgactcagtttgtctgcaacgtcatacaaggccgcatgatcattataatcatagacttg
aatgtgatacttgaaaggtgtgatcccataggcgaaccaaggcaatttgaaaggcccagt
accggtactgctaccccagtggcaagatcttctgcacagatgcagtcaactgctgatcag
tctgggtctagtatttgcaatcaaccatcttatgttggtagttcacttggtggctctgtt
gctaaaccaaatgtactgggtggctcagttaacaatcctgaccagggacgatataatggg
ccaaacgcacaccatatgtatatcaaaccagaaattggtgctggggtatcgcgggctcca
tttaatagttatgttcgtccacaacaggctgcatatcagcaaccacctccaatgtataca
aacagaggacctgttgccaagaacgaggctccccctaggattattccaattgctgctttg
aatccatatcaggggaggtggacaattaaggccagagtgacagcaaagggggaacttaga
cactatagtaatccccggggtgagggtaaagtattctccttcgatcttcttgattctgat
ggtggagaaattcgagtcacctgctttaatactgttgctgatcaattctacaaccagatt
gaggctggtaagatttatctgatttccaaggggagcctaaaacctgctcagaaggctttc
aatcatcttcgtaatgatcatgaaattctcctggacagtacatcaacagttcagccttgc
cctgaagatgataactcaattccacggcaacaatttcatttccatcctataattgacatt
gagggcatggagaacaacagtattgtagatgtgattggcgtggtatcttttatcagtcca
tctacttcaataatgagaaaaaatggtactgaaactcaaaggagggttctccagttgaag
gacatgtctggacgaagtgttgaacttactttatggggacaattttgcaatgcagaagga
cttgaaatgcaaaagatgtgtgattctggtgtgtttcctgttgtggctgtgaaatctggt
agagttagtgactttaatgggaaggctgtaggaaccatatcctcaagccagttaatcata
gaaccagatttcccagaggctcaaaggctaaaagaatggtttcagaatgagggtagaaac
acaccatctgtctctatatccagggagataatgaccataggaagaacagatgttcggaaa
actatatctcagattaaagatgataaactagggacttcagagaagccagattggattaca
gtcagtgcgactatctcattcataaaagttgataatttctgctatacagcatgtcctatc
atggttggagatcgacaatgcaacaaaaaggttacaaacaatggtgacggaaaatggcgg
tgtgataggtgtgatcaatctgttgatgaatgtgattaccgatatattctccagtttcag
atacaagaccacactggtttgtcatgggtaacagcatttcaagaatgtggtgaggacatc
atgggtgtatctgcaaaagatctgtactacttgaaacatgaagagcaggatgatgaaaaa
tttggagaaattgtgcgaaaagttctattcactaaatatgtattcaagttgaaagtgaag
gaggagatgttcagtgatgaacagcgggtcaagtccactgtggtcaaagcagagaagatc
aatttcttatcagagtccaggtttcttctggatttgatggataagcttaaaggggagaat
aatgccagttctttaggccccaaaactgaagatgtctttttgagcactggagtaaaaaat
actggctctgggactttcggagctagacaacctcccccttctgctggattgccaactaat
caaacgagtcagtatggaaaccagtacaatggttctagatttactgctagtggatccagt
ggttcgtatttgagctgcaacagctgtggtggtacagggcatagttcatcaaactgcccg
agtgtgatgactggtcagggacactcgtatggaagtggctttgctactaagacatctcct
ggggctggcatggccggtgcatctagtgagtgctttaaatgtcaccaatttgggcattgg
gcaagagattgccctggtttgagcaatgtacccccagcctatgggaatagcaatgttaca
cctggaagatacggtggtgttgcaaaacaaagggttggtggcttttga
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