Diospyros lotus (date-plum): 127813627
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Entry
127813627 CDS
T10632
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127813627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127813627
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
127813627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
KNTC1_N
Beta-prop_SCAP
Beta-prop_DCAF4
Peptidase_M10_C
Tricorn_2nd
Aldo_ket_red
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
127813627
NCBI-ProteinID:
XP_052210638
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All DBs
Position
11:226501..240928
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AA seq
498 aa
AA seq
DB search
MDSPTTASLENQSAMRVPSSPSAELNLPPTMSRPALSLPPSRHIDRMVGMGYQPSPSRTI
YSDRFIPSRSGSNFALFDISPSSNSPSDGREDASGAYTALLRSALFGPDSGTILPATPDK
GVGVIGRNSPMTPPSRNIFRYKTETRQSVHSLSPFGFDAELPGVSHSPVKAPRKVPRSPY
KVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGW
AQRGTHLAVGSSNGKLQIWDASHCRRVRTMEGHRLRVGALAWSSSVLSSGSRDKCILQRD
IRAQEDFVSKLTGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPALKYCEHTAAV
KAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTH
GYSQNQIIVWRYPTMSKLATLTGHSFRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKS
QNTDSEIGASSLGRTQIR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccacgacagcttcattggagaaccaatcagcaatgagagtcccatcttcg
ccttctgcggagctcaatcttcctccgacaatgtcccgaccggctctttctctgccgcct
tctcggcacatcgacagaatggtgggcatgggctaccaaccctcgccttcccgcaccatc
tacagcgatcgcttcatccctagccgctccggctccaactttgcccttttcgacatctcc
ccttcctccaattcgccctccgacggccgcgaggacgcttccggcgcatataccgcgctg
ttgcgctccgcattgtttggcccagactccgggaccatccttccggcaacgcccgacaag
ggggtgggggtgatcggccggaattccccgatgaccccgccaagccggaacatcttccgt
tacaagacagagactcggcagtctgtgcactcgctttcgccttttgggttcgatgctgaa
ctgcccggtgttagtcatagcccagtgaaggctccacgaaaggtccccaggtcgccttac
aaggtattggatgcaccagcgttgcaggatgatttctatctgaatcttgtcgattggtct
tctcacaatgtgttggctgttgggttgggtaattgtgtttatttgtggaatgcttgtagt
agcaaggtgacaaaattgtgtgatttgggaattgatgatagtgtatgttcagttggttgg
gctcagcgtggcacacatcttgctgttggtagtagtaatgggaaacttcagatttgggat
gcctctcactgtaggagggtaagaactatggagggccatcggttgcgcgttggagcccta
gcctggagttcatccgtgttgtcttcaggtagtcgggacaagtgtattcttcaacgagat
atacgtgctcaggaagactttgtcagtaagcttactggacacaagtcagaggtttgtgga
ctaaagtggtcctatgataaccgagagttagcttctggaggaaacgataatcgacttttt
gtatggaatcaacattcaactcaacctgcactaaagtactgtgagcatacagctgctgtg
aaggcaattgcatggtcccctcatcttcatggccttcttgcttcagggggtggtactgca
gaccgatgcattcgtttctggaacacgaccactaacacgcatctaagctgcatggacact
ggcagccaggtgtgcaatcttgtgtggtctaaaaatgtcaatgaacttgtcagcacccat
ggatattcccagaaccaaataattgtatggagatatcctactatgtcaaagttggcaact
ctcacgggccattcatttagagttctttaccttgcaatctcacctgacggacagacaatt
gtcacaggagcaggtgatgaaacacttaggttttggaatgtgttcccttcccctaaatct
cagaatactgacagcgaaattggagcatcttctcttgggagaactcagattaggtga
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