Diospyros lotus (date-plum): 127814137
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Entry
127814137 CDS
T10632
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127814137
Transcription machinery [BR:
dlt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
127814137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
DUF6526
Motif
Other DBs
NCBI-GeneID:
127814137
NCBI-ProteinID:
XP_052211376
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All DBs
Position
1:complement(45936957..45941869)
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AA seq
516 aa
AA seq
DB search
MGVVTVSSSASRTPLGLNATFSSYQSPAKRPLILAFKTNKSKNATLITPPERASVPVETP
RENQKRLRGSRKSRERVKAITTDETSSCTLELDYNEAAAKLENIYKLSPTADPPQLEDRD
VTLRRGRKRKGKIGEGEDTADNKKVKNIVKNRQKKSKRLSLDKRIALRKVKDGEMFSRIQ
KGNNTKDEEDTISKLVRDYSVSTDLVSLDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQV
KETLQQDLGREPTDGELAEATNMTVVQVRRQLEVGHAARNKLIKHNLRLVLFVMNKYFQE
FANGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTLSSFTRVPFG
LESVRVEIQRAKLELSFELQRLPTEEEIIEKVGISPGRYHEVMRASKAVSSLHAKHATTQ
EELINGITDIDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPARVDYLRCYVF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctagttcagcttcgaggactccattgggattgaacgcaact
ttctcatcttaccaatctccagcaaaaagaccattgattttggcatttaaaacaaacaaa
tccaagaacgcaactttgattacacctcctgagcgagcatcggttcctgttgagactcct
agagagaaccagaaaagactaaggggttctaggaaatccagagaaagagtgaaagctata
actacagatgagacctcctcatgtactttagaactggattacaatgaagcagctgccaaa
cttgaaaacatatacaaacttagccccacagctgacccccctcaactggaagacagagat
gttacattgaggagaggtaggaagcggaaggggaagataggggaaggtgaggacacagca
gataacaaaaaagtaaagaatatagtaaagaataggcagaagaagtcaaaacgactgagt
cttgataagaggattgcattgaggaaggtcaaagatggtgaaatgttttctagaattcag
aaggggaacaataccaaggatgaagaagatacgatcagcaagcttgtgagggattattca
gtttcaactgatttggttagcttggattggaaaaagatgaagataccagcagttctgcct
tcttctgaacatgcatggctatttaaattgatgcagcctatgaaggcactgcttcaagtc
aaggagacgctgcagcaagatctggggcgagaaccaactgatggtgagctggcagaggca
acaaacatgactgttgtccaagtacgaaggcaattagaagttggtcatgctgccagaaac
aagctgattaagcacaatctccgactcgttttgtttgtgatgaacaaatattttcaagag
tttgcaaatggccctaaattccaagacctctgtcaagcaggggtaaagggtcttatcacg
gcaattgaccgctttgaaccaaaaaggaaattccggctctccacctatggtctcttttgg
attaggcatgctataattcgatcaatgacgctctcaagttttacgcgggtgccctttggc
cttgagtcggttagagtagaaatccaacgagccaaactagaattgtcgtttgagcttcaa
agattaccaacagaagaagagatcatagagaaagttgggatctctcctgggaggtatcat
gaagtgatgagggcatcaaaagccgtctcctctctccatgctaagcatgctacaacacaa
gaagagctcatcaacgggattactgatatagatggtgttggaggggataagaggagacaa
cctgctcttctcaggcttgctctagatgatgtgcttgattcgctgaagcccaaggaaagc
ttggttatcaggcagaggtatggacttgatggcaaaggagatagaacactgggagagatt
gcaggaaacttgaatatctcaagagaaatggtccgtaaacatgaggtgaaagctctgatg
aagctcaagcacccagctcgtgttgattaccttcgttgttatgttttctaa
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