Dietzia lutea: A6035_05040
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Entry
A6035_05040 CDS
T05442
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dlu
Dietzia lutea
Pathway
dlu03420
Nucleotide excision repair
dlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6035_05040
03430 Mismatch repair
A6035_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlu03400
]
A6035_05040
Enzymes [BR:
dlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6035_05040
DNA repair and recombination proteins [BR:
dlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6035_05040
MMR (mismatch excision repair)
Other MMR factors
A6035_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWH91632
UniProt:
A0A2S1R5U5
LinkDB
All DBs
Position
1140635..1143961
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AA seq
1108 aa
AA seq
DB search
MTASIDPAAIADALGIHRPTPEQAEVIAGPTEPTLVLAGAGAGKTETMAARVVWLVANGY
ARPGEILGLTFTREAAQQLSRRIRRRLDALARSALCSGPGADPAIAEAIRTEDPQISTYH
AFAGTLLGTYGLLVPVEPDSRLLTPTAAFQLAHDVVSRWESPLTTGSNPGTVTRDVLALA
GQLSDHLVTTDDLRSHPDLITTLIATLPPGPRQKATPTAWLGRTAEIQGHREELADLVDA
VTAHMRAESALDHASQMALAATVARDHPSVGLAERRAFRVVLLDEYQDTGHSQRVLLSSL
FGAGADPAPAVTAVGDPMQSIYGWRGASASNLDRFREDFPLPGGRPSHLRELTTSWRNPP
EVLTLANRITAPLRDRPGSIPVPELRARPGAEPADLRVALLDTAEDEREWLADTLADRYR
AAEGAGRVPTAAVLVRRNGDSAAIAEALEARGLPVEIVGVGGLLDVPEVADVVALLTVVA
RPGAGPALLRLLSGSRFALGAADLAALARRASRLSLRRPASATGAVSDPRELDDLLDALA
RGEETDSAGLADALADPGPEDQYSPAGAQRISELAAIISGLRARSSAPPARLVAAAEQAL
GLDAEVRLRQRAGRGEAREQLDALQEVAAGFRPERGTGLDAFLAYLDLARSVDGGLARGE
VASRPGRVQILTVHSAKGLEWEIVAVPHLADGVFPSGQPPQTSVRTATQLPEQLRGDRET
EDNPGGVPVPRLDGVTDRKLLEEALGTHIKRVERRSLDEDRRLFYVAVTRAEQTLLLSGS
HWLGSATTPKGPSEFLGDVLDACGGEPPLGVIDHLVVTPSPTNPATAGTVEATWPREAAP
DRLAAARAVGTADPVDPEAQAPPESGPARRWHLAAASLLADARRAAQRRDEVHLPRRLTA
GEIVAMATDPAEFADRLRRPVPFRPDRFARRGTRFHAWLEHRYGATHLLDIDDLPGAGDQ
GAVDGLSEADLTALQQAFEASRWARMTPDAVEVPFEVGLGGHLLRGRMDAVFADGDGWIV
VDWKTGRMPAERDMPAVALQLAVYRYAWAKVVGARLGRTVELGSVRAAFHYVRSGRTLEP
ADLPDAEELLRILSEGPGRGRLLSESGR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgtcgatcgaccccgccgccatcgccgacgcgctcggcatccatcgacccacc
cccgagcaggccgaggtgatcgccgggccgaccgaacccacgctcgtgttggccggggcg
ggcgccggtaagacggagaccatggcggccagggtcgtgtggctggtggccaacgggtac
gcgcgaccgggggagatcctcggcctgaccttcacccgtgaggccgcccagcagttgtcc
agacggatacgccgccgcctggacgcgctcgcccgtagcgcgctgtgctccgggcccggc
gcggaccccgcgatcgccgaggcgatccgcaccgaggacccgcagatctccacctaccac
gccttcgccggcaccctgctcggcacctacggcctgctcgtacccgtcgaaccggactcg
cggctgctcacgcccaccgccgccttccagctcgcccacgacgtggtgtcgaggtgggag
agtccgctgaccacggggtcgaatcccggcacggtgacccgcgacgtgctggccctggcc
gggcagttgtccgaccacctggtcaccaccgacgacctgcgctcgcaccccgacctgatc
acgaccctcatcgcgaccctcccgcccgggccgcggcagaaggcgacccccaccgcgtgg
ctcgggaggaccgccgagatccagggccaccgggaggaactcgcggacctggtggacgcg
gtcacggcccacatgcgggcggagtcggcgctcgaccacgcctcccagatggccctggcc
gccaccgtcgcccgcgaccacccctcggtcgggctcgccgagcgccgcgcgttccgcgtg
gtgctgctcgacgaataccaggacaccgggcactcccagcgtgtcctcctgtcctcgctg
ttcggtgccggggccgacccggccccggccgtgaccgccgtcggtgaccccatgcagtcc
atctacgggtggcggggggcgtcggcctccaacctcgaccgcttccgcgaggacttcccg
ctgcccgggggccgcccctcgcacctgagggaactcacgacctcgtggcgcaacccgccc
gaggtcctcaccctggccaaccggatcaccgcgccgctgcgcgaccggcccggatccatc
ccggttcccgaactccgggcccggcccggggccgagcccgcggacctcagggtcgcgctg
ctcgacacggcggaggacgaacgcgagtggctcgccgacaccctcgccgacaggtaccga
gcggcggagggggccggccgcgtaccgaccgcggcggtcctcgtgcgtcgtaacggcgac
tccgccgcgatcgccgaggccctcgaggcccgcggcctaccggtcgagatcgtcggcgtc
ggcgggctgctcgacgtgcccgaggtcgccgacgtcgtcgccctgctcaccgtggtcgcc
cgcccgggcgccggccccgcgctgctgcgactgctcagcggctcccggttcgcgctcggc
gcggccgatctcgccgccctcgcccggcgcgcgtcccggctgtccctgcgcagacccgcg
tccgcgacgggggccgtctccgacccccgcgaactcgatgacctcctcgacgccctcgcc
cgcggcgaggagacggactcggccggactggccgatgcgctcgccgacccgggcccggag
gaccagtacagccccgccggcgcgcagcgcatcagcgaactcgcggccatcatctccggg
ctccgcgcccgctcgtccgcgccacccgcgcggctcgtcgcggccgccgaacaggccctc
gggctcgacgccgaggtccgcctgcgccagcgcgccggccgtggcgaggcccgcgaacaa
ctcgacgcgctccaggaggtggccgccggcttccggcccgagcgcggaaccgggctggac
gcgttcctggcctacctcgacctcgcccgctccgtcgacggcgggctcgcccgcggtgag
gtcgcctccaggcccggacgggtgcagatcctcaccgtccactcggccaagggcctcgaa
tgggagatcgtcgccgtgccgcacctggcggacggcgtcttcccctccggccagccaccg
cagacctccgtccgcaccgcgacccagctgcccgagcagctgcggggcgaccgcgagacc
gaggacaaccctggaggggtgccggtcccgcgactcgacggcgtgaccgaccgcaagttg
ctggaagaggcgttggggacacacatcaagcgggtcgagcggcgctccctcgacgaggac
cgccggctgttctacgtcgcggtcacccgggccgagcagacgctgctgctgtccgggtcg
cactggctgggatccgccaccacacccaaggggccgtcggagttcctcggggacgtgctc
gacgcgtgcgggggagaaccaccgctcggggtgatcgaccacctcgtcgtcacaccctct
cccacgaaccccgccaccgcgggcaccgtcgaggcgacctggccccgcgaggccgcgccc
gaccgcctcgccgccgcgcgggcggtggggacggccgaccccgtggaccccgaggcccag
gcgccaccggagtcgggccccgcccggcgctggcacctggccgcggcgtccctgctcgcc
gacgcgcggcgggccgcgcagcgccgcgacgaggtgcacctcccgcgccgtctcaccgcc
ggggagatcgtcgccatggcgaccgaccccgccgagttcgccgaccgcctccgccggccc
gtgcccttccgcccggaccggttcgcgcggcgcggcaccaggttccacgcctggctcgag
caccgctacggcgccacccacctgctcgacatcgacgacctacccggcgccggcgaccag
ggtgccgtcgacggattgtccgaggccgacctcaccgccctccagcaggcgttcgaggcg
tcgcggtgggcgaggatgacgcccgacgccgtcgaggtgcccttcgaggtcggcctgggc
ggacacctcctgcgcggacggatggacgccgtgttcgccgacggcgacggatggatcgtc
gtggactggaagaccgggcgtatgcccgcggaacgggacatgcccgccgtcgccctccag
ttggcggtctaccggtacgcgtgggcgaaggtcgtcggggcccgcctggggcggaccgtt
gagctggggtccgtccgcgccgcgttccactacgtgcgctccgggcggaccctcgaaccg
gcggacctgcccgacgccgaggaactgctgcgtatcctctccgagggccccggccggggc
cggttgttgtccgaaagcggtcgatag
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