Dietzia lutea: A6035_07590 Help Entry A6035_07590       CDS       T05442                                  Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism dlu  Dietzia lutea Brite KEGG Orthology (KO) [BR:dlu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:dlu03016]     A6035_07590 Enzymes [BR:dlu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      A6035_07590 Transfer RNA biogenesis [BR:dlu03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     A6035_07590  Prokaryotic type    tRNA splicing ligases     A6035_07590 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  AWH92048 UniProt:  A0A2S1R6Y3 LinkDB All DBs Position 1695640..1696815 Genome browser AA seq 391 aa AA seqDB search MPVTLAPNVLSWASAIDETTVDQAVALARLPIIHPHIALMPDAHAGKGSAVGTVIPTVEA VIPAAVGVDIGCGMVAARTRYTESDLDRIDLSTLRDRLERAIPLSPGNYNKAVRHDHTRE RVRELEMLADSGGVDLSHSPKWREQLGSLGGGNHFIELCLDESGAVWCFLHSGSRGVGNK IAQKHIRIAQAHCAERGIQLEDRDHAYLEQSTTEFTEYLAELRWAQRFARLNRDEMMDRF LAELARIFRDDDAGESQRVNCHHNYTEKIALDGREVWLTRKGAIDASEGRMGCIPGSMGT RSYIVRGKGNADGLFSAPHGAGRRMSRTQAKRRFSAADLDAAMQGIVYRPGDAWVDEIPA AYKDIDRVMEDADDLVEIVHTLRQVMNLKGT NT seq 1176 nt NT seq  +upstreamnt  +downstreamnt atgccagtcactctcgccccgaatgtgctgtcctgggcgtcggcgatcgacgagacgaca gtagaccaggcggtggccctcgcgcggctgccgatcatccacccacacatcgcactcatg ccggacgcgcacgccggcaaggggtccgcggtgggcacggtcatcccgacagtcgaggcg gtcatcccggccgcggtcggggtcgacatcggatgcgggatggtggccgcgcgtacccgg tacacggagtccgacctggaccgcatcgacctgagcacgttgcgcgaccggctcgagcgc gcgatcccgctgtcgccgggcaactacaacaaggccgtccggcacgaccacacacgggag cgggtccgcgagctcgagatgctcgccgactccggcggcgtcgacctgtcccactcgccg aagtggcgcgagcagctcgggagcctcggcggggggaaccacttcatcgagctgtgtctc gacgagtccggagcggtctggtgcttcctgcactccgggagccgcggggtgggcaacaag atcgcccagaagcacatcaggatcgcccaggcgcactgcgcggagcgaggcatccagctc gaggatcgcgatcatgcgtacctggagcagagcaccaccgagttcaccgagtacctcgcc gaactgagatgggcgcagcgtttcgcgcgactcaaccgagacgagatgatggatcgcttc ctcgcggagttggcccgcatcttccgcgacgacgacgccggcgaatcgcaacgcgtcaac tgccaccacaactacaccgagaagatcgcactcgacggcagggaagtgtggctcacccgc aagggcgccatcgacgcgagcgagggccgcatggggtgcatcccgggatcgatgggcacc cgctcgtacatcgtccgcggcaaggggaacgcagacgggttgttctccgcgccgcacggt gccggtcgtcggatgtcgcgcacacaggccaagaggcggttcagcgcagccgacctcgac gcggcgatgcagggaatcgtctaccggcccggcgatgcgtgggtcgacgagatccccgcc gcctacaaggacatcgaccgggtgatggaggatgccgacgacctcgtcgagatcgtgcac accctgcggcaggtgatgaacctcaaggggacgtag

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