Dietzia lutea: A6035_09425
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Entry
A6035_09425 CDS
T05442
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dlu
Dietzia lutea
Pathway
dlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6035_09425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlu03021
]
A6035_09425
03019 Messenger RNA biogenesis [BR:
dlu03019
]
A6035_09425
Transcription machinery [BR:
dlu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A6035_09425
Messenger RNA biogenesis [BR:
dlu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A6035_09425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
AWH93878
UniProt:
A0A2S1RC65
LinkDB
All DBs
Position
complement(2087437..2089470)
Genome browser
AA seq
677 aa
AA seq
DB search
MRLPELKALAQQMGLKGLSGKRKGDLVAMIEGARGGRPAQSDAPRRAETPRQAETPRQAE
APREAETTSRADAPQQADAPRREEAQAQSESPSAAGSAPSTGTGRRGRGSRADNAGDKPR
NGADGGDAAPAGDEGGPRGDGRAQGERSRREDGGRGGQRQGRGQQNRDQDTRDQQGGRND
QGDQGGRNDQRNQGGRNDQRNQGGRNNQGGRNDQDGQGTRNDQGGQDGGDNGPRGDGQNR
DDDGGGRGRRGRRRRERNRGGNRQTEGDTEVREDDVLQPVAGILDVLDNYAFVRTSGYLA
GNNDVYVSMNMIRRYGLRRGDAITGAVKMPRDGQSDAQHDGPGGGQGGGRGGGQGGKNRA
KFNPLARIDTVNGSPADQARQRPDFSKLTPLYPNQRLRLETEKNIISTRVIDLIMPIGKG
QRALIVSPPKAGKTTILQNIANAIATNNPECHLMVVLVDERPEEVTDMQRSVKGEVIAST
FDRPPSDHTQVAELAIERAKRLVELGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDS
TALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRRIAE
RRVFPAVDVGPSGTRKEELLMSPEEAGIMHKLRRVLSGLDTHQAIDLLMSQLRKTNTNYE
FLLQVAKTTPTLPQDEE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcccgagctcaaggcgctggcacagcagatgggcctcaagggcctgtcgggt
aagcgcaagggcgacctcgtcgccatgatcgaaggcgcgcggggcggccgccccgctcag
tccgacgcaccgcgccgtgccgagaccccgcgccaggccgagaccccgcgccaggcagag
gccccgcgcgaggcagaaacgacgagccgggccgacgcaccgcagcaggcggacgcgccc
cgccgcgaggaggcgcaggcacagtccgagtctccgtcggccgccggatcggcaccgtcg
accggcacggggcgccggggacgcggcagccgcgcggacaacgcgggggacaagccgcgc
aacggcgccgacggcggcgacgccgcaccggcgggcgacgagggcggcccccggggcgac
ggacgcgcgcagggcgagcggtcgcgccgcgaggacggtggtcgcggtggtcagcggcag
ggacgcggtcagcagaaccgcgaccaggacacccgcgaccagcagggcgggcgcaacgac
cagggtgaccagggcggccgcaacgatcagcgcaaccagggcggccgcaacgatcagcgc
aaccagggcggccggaacaaccagggcggtcgcaacgaccaggacggtcagggaacccga
aacgaccagggcggccaggacggtggcgacaacggcccccgtggcgacggccagaaccgc
gatgacgacggcggtggccgcggtcgtcgtggccggcgccgtcgcgagcgcaatcgtggc
ggcaaccgccagaccgagggtgataccgaggtgcgggaggacgacgtcctccagccggtc
gcgggcatcctcgacgtcctcgacaactacgcgttcgtccgcacctccggatacctcgcc
ggcaacaacgacgtctacgtgtcgatgaacatgatccgtcgctacgggctgcgtcgcggt
gacgcgatcaccggcgcggtcaagatgccccgcgacgggcagtccgacgcacagcacgac
ggtccgggcggcggccagggcggcggccgcggtggcggacagggcgggaagaaccgggcg
aagttcaatccgctcgcccgcatcgacacggtcaacggcagcccggcggaccaggcccgc
cagcgcccggacttctccaagctcaccccgctgtaccccaaccagcggctgcggctcgag
acggagaagaacatcatctccacccgcgtgatcgacctgatcatgccgatcggcaagggg
cagcgcgccctcatcgtgtcgccgccgaaggccggtaagaccacgatcctgcagaacatc
gccaacgcgatcgccacgaacaatcccgaatgccacctcatggtcgtcctcgtcgacgag
cgaccggaggaggtcaccgacatgcagaggtcggtcaagggcgaggtcatcgcctcgacc
ttcgaccgtccgccgtcagaccacacgcaggtcgccgagctggcgatcgagcgcgcgaag
cggctggtggagctgggccaggacgtggtcgtcctcctcgactcgatcacgcgtctcggc
cgcgcctacaacaactcgtccccggcctcggggcgcatcctgtccggtggtgtcgactcg
accgccctgtacccgcccaagcggttcctcggcgcggcacgcaacatcgagaacggcggc
tccctgacgatcatcgcgaccgcgatggtcgagaccggctcggccggtgacaccgtgatc
ttcgaggagttcaagggcaccggcaacgccgagctcaagctggaccggcggatcgccgag
cgccgggtcttcccggccgtcgacgtcggcccctcgggcacccgcaaggaggagctgctc
atgagccccgaggaggcgggcatcatgcacaagctccgccgggtgctctcgggtctggac
acccaccaggccatcgacctgctcatgtcgcagctgcgcaagaccaacaccaactacgag
ttcctgttgcaggtggccaagacgacgcccacgctgccgcaggacgaggagtga
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integrated database retrieval system
