Dietzia lutea: A6035_09495
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Entry
A6035_09495 CDS
T05442
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dlu
Dietzia lutea
Pathway
dlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6035_09495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlu03019
]
A6035_09495
03009 Ribosome biogenesis [BR:
dlu03009
]
A6035_09495
Enzymes [BR:
dlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6035_09495
Messenger RNA biogenesis [BR:
dlu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6035_09495
Ribosome biogenesis [BR:
dlu03009
]
Prokaryotic type
rRNA helicases
A6035_09495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWH92363
UniProt:
A0A2S1R7W5
LinkDB
All DBs
Position
complement(2107819..2109846)
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AA seq
675 aa
AA seq
DB search
MENNDEDRTATAGDEVDTDASTPETPAAAPAGSRDDAPRDEAPAEDAAVTFADMGLAPAV
AKAVRDVGYEVPSAIQAATIPLVLEGRDVVGLAQTGTGKTAAFALPILSLIDPAVKSPQA
LILAPTRELALQVAEACVTYSAGMPQVNVLPIYGGQAYGIQLSGLRRGAQIIVGTPGRVI
DHLKKGTLDLSGLRHLVLDEADEMLAMGFQEDVERILSDTPESTQVALFSATMPSAIRRI
SQKYLTNPTEVKVASKTSTAPTIQQRYVLVNHRDKLDALTRILEVEDFDAMIMFVRTKSA
TEELAERLRARGFSAAPINGDIPQNLRERTIEALKDGRTDILVATDVAARGLDVPRISHV
VNYDIPHDTESYIHRIGRTGRAGRSGHALLFVTPRERRLLSQIERATRQPLTEVQLPSVD
DVNEMRMAKFAQSITESLDDPNIALFRRLVEEYASEHSVSMADIAAALATQSRNSDEFLM
REPERPQRRERQDDRGGDRRDRPARNFSDGPRPSRSGKDMAQYRIAVGKRNNVKPGSIMG
ALANEAGLSGGDIGRISIRFDHSIVELPAGLPSDQLESMKGIRVGGAEIDIRPDSGAPAG
RPSSFRDDRGGKPRGGGHRRDDRGDRGGYSDRRSERHGDRRDHRRDDRGGFRRGDDERRG
VGGFRGRSGGGQDRY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacgacgaggaccgtaccgccaccgccggcgacgaggtcgacaccgacgcc
agcacgcccgaaacgcccgcagccgcgcccgccggatcccgcgacgacgccccccgcgac
gaggctcccgccgaggacgccgcggtcaccttcgcggacatgggtctcgcgcccgccgtc
gcgaaggcggtccgggacgtcggctacgaggtgccgtccgccatccaggcggccaccatc
ccgctcgtcctcgagggacgggacgtcgtcgggctcgcccagaccggtaccggtaagacg
gccgcgttcgcgctgcccatcctctcgctgatcgacccggcggtgaagagcccccaggct
ctcatcctggcgccgacccgcgagctcgcgctccaggtcgccgaggcgtgcgtcacctac
tcggcgggcatgccccaggtgaacgtcctgcccatctacggcggtcaggcctacgggatc
cagctctcggggctccggcggggcgcgcagatcatcgtcggcacccccgggcgggtcatc
gaccacctcaagaagggcacgctcgatctctcgggcctgcggcacctcgtcctcgacgag
gcggacgagatgctcgcgatgggtttccaggaggacgtcgagcggatcctctcggacacc
ccggagagcactcaggtcgcgctgttctcggcgacgatgccgtccgcgatccgacggatc
tcgcagaagtacctcaccaatcccaccgaggtgaaggtcgcctccaagacgtcgaccgcg
ccgaccatccagcagcgctacgtcctggtcaaccaccgtgacaagctcgacgccctgacc
cgcatcctcgaggtcgaggatttcgacgcgatgatcatgttcgtccggacgaagtcggcg
acggaggaactcgccgagcggctgcgcgcacgtggtttctccgccgcccccatcaacggc
gacatcccccagaacctccgcgagcgcaccatcgaggcactcaaggacgggcgcaccgac
attctcgtcgcgaccgacgtcgccgcccgcggcctcgacgtgccgcgcatcagccacgtc
gtcaactacgacatcccgcacgacaccgagtcgtacatccaccgcatcggccgcacgggc
cgcgccggccggagcgggcacgcgctgctgttcgtcaccccccgcgaacgtcgactgctg
tcccagatcgagcgggcgaccaggcagccgctgaccgaggtccagctgcccagtgtcgac
gacgtcaacgagatgcggatggccaagttcgcacagtcgatcaccgagagtctcgacgac
cccaacatcgcgctgttccgccgcctcgtggaggaatacgcgtccgagcactccgtctcg
atggccgacatcgccgccgcactggcgacccagtcccgcaactcggacgagttcctcatg
cgtgagccggagcgtccccagcggcgtgagcggcaggacgaccgcgggggcgaccgacgc
gaccgtcccgcgcggaacttctccgacgggccgcggccgtcgcgctcgggcaaggacatg
gcccagtaccggatcgccgtgggcaagcggaacaacgtcaagcccggttccatcatgggc
gcgctggccaacgaggccggcctcagcggcggtgacatcgggcgcatctcgattcggttc
gaccactcgatcgttgagctgcccgccggcctgccgtcggatcagctcgagtcgatgaag
ggcatccgggtcggcggtgccgagatcgacatccgacccgacagcggtgcgccggcggga
cggccctcctccttccgggacgaccggggtgggaagccgcgcggcggaggccaccggcgc
gacgaccgcggtgaccgcggtggttactccgatcgccgcagcgagcggcacggggatcgc
cgggaccaccggcgcgacgaccggggcggattccgccgcggcgacgacgagcgtcgcggc
gtcggagggttccgggggcgttccgggggcggacaggaccgctactga
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