KEGG   Dietzia lutea: A6035_11130
Entry
A6035_11130       CDS       T05442                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dlu  Dietzia lutea
Brite
KEGG Orthology (KO) [BR:dlu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dlu03400]
    A6035_11130
Enzymes [BR:dlu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A6035_11130
    5.6.2.6  RNA 3'-5' helicase
     A6035_11130
DNA repair and recombination proteins [BR:dlu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    A6035_11130
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr WH2_Lhr DEAD Helicase_C ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: AWH92627
UniProt: A0A2S1R8J9
LinkDB
Position
complement(2473934..2478655)
AA seq 1573 aa
MPAALDRFHPATASWFRGAFDAPTAAQEGAWTALAGGSHTLVVAPTGSGKTLSAFLAALD
GLLLGDRDGAPDPGPGTRVLYISPLKALAVDVERNLRAPLAGIAREAASMGVPTPDVTVG
IRTGDTPPDERRRQRARPPHILVTTPESLFLLLTSAARETLATVDTVIIDEIHAVAGSKR
GAHLALSLERLDELLDTPAQRVGLSATVRPHSEVARFLAGERPTTIVAPGSDKGFELSVR
VPVEDMADLSSSAPEVTAPPGTPGQGSIWPHVERQVVDLVAAHRSTIVFVNSRRLAERLT
ARLNEIYAEDTDPGSLPEPPARPPAQLMVPSEVSRGAPPELAMAHHGSVSKERRAIIEDA
LKSGRLRAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGEVSRAVVYP
KHRADLVHSAVTVERMLAGAIEGLTVIANPLDVLAQQTVAACALEPIDVEEWFSAVRRTA
PYAGLPRSAFEATLDMLAGKYPSADFAELKPRLVWDRDAGTLTGRPGAQRLAVTSGGTIP
DRGLFGVFMVGEKATRVGELDEEMVYESRVGDVFALGASSWRVEEITHDRVLVSPAPGGT
GRLPFWLGDDQGRPAELGRALGGFLREVSAGSEAEVTARLDAAGLDAYAAANLRRYLADQ
REATGHVPSDTTLVVERFRDEVGDWRIVLHSPFGARVHWPWAEAVRARLAAAHGFDAVPV
VSDDGIILRVPDTGDDGEGGARPGAETFAIGAEEAVDLVTRHVGGSALFASRFRECSARA
LLFPRLDPGRRAPLWQQRQKSAQLLDVARSYPDFPMILEAVRECLQDVYDVPALERLLGE
IESRSVRIVEVDTPGASPFAQSLLFDYVGAFLYEGDSPLAEKRAAALSIDPGLLGQLLGR
VELRELLDVAVLDSIERRLQHLEPERAARDAEAVVDLLRLLGPLTVDEITERSADPDAVP
GWLDELARTWRIVPVEHSGRSWWAGVEDVARLRDGLGVPPPPGVPSAFLGDVDDPLGELI
RRYARTHGPFSVEAVAERFGLGVAVARGVLDRLTSSGTLLAGEFRPGATGPEWCDAEVLR
HIRRRSLAALRSQIEPVSHSALGRFLPGWQSLGSGGAESGVDGLLAVIEQLDGLALPASA
LEPLVLAPRVSDYSPAMLDELLAGGEVIWSGRGRAGSRDGWVSLHPADSAGATLPLERPQ
PEGPVHLAVVDSLRGGALFFRDIVTAVKNALTAPTDPVPTDTAPTDTAPTDTAPTDTAPT
VTESAVRDALWDLVWDGVVTNDTLAPLRAVLAGGGSSGSGTAHRSPRASARPRRARFGRT
AMAQLNGAVAAGTRTPPVLAGRWSLVPESITDATLRAHAWAETLLLRHGVVTRGAVEAEE
IPGGFAAVYKVLAQMEDSGRCRRGYFVDGLGAAQFAAGNTIDRLRTFDDTADDAHWPSGT
DEPTVRVLAATDPANPYGAALPWPTAVPSAGAAAVAGGSGHRPGRKAGALVVLVDGICVL
FVERGGRTVLVFDDRTGAVPLAAGALVDAVRAGAVGPLTVTTLGGEPVHGSPHAAAFEAA
GFGITPKGLRIRR
NT seq 4722 nt   +upstreamnt  +downstreamnt
atgcccgccgccctggaccggttccacccggccaccgcctcctggttccgaggcgcgttc
gacgcgcccaccgccgcccaggagggggcgtggaccgcgctcgccggcggatcgcacacc
ctggtcgtggcgcccaccggttcgggcaagaccctgtcggcgttcctcgccgcgctcgac
gggttgctcctgggcgaccgggacggcgcgccggaccccggccccggcacccgtgtcctc
tacatatcgccgctcaaggcgctcgcggtggacgtcgagcgcaacctgcgcgcgccgctc
gccggcattgcccgcgaggccgcgtcgatgggggtgccgacgccggacgtcaccgtcggg
atccgcaccggtgacaccccgccggacgagcgtcgccgccagcgcgcccggccgccgcac
atcctcgtgaccaccccggagtcgctgtttctgctcctcacctccgcggcgcgggagacc
ctcgccacggtggacacggtcatcatcgacgagatccacgcggtcgccggcagcaaacgc
ggggcgcatctcgccctgagcctcgagcggctggacgagctgctcgacacgcccgcgcag
cgggtcgggctgtcggcgacggtgcggccgcacagcgaggtcgcccgcttcctcgcgggg
gagcggccgaccacgatcgtggcgcccgggtcggacaagggcttcgagctctcggtgcgc
gtgccggtggaggacatggcggacctgtcctcgtcggccccggaggtcaccgcgccgccc
ggcacgccgggtcagggctccatctggccgcacgtggagcgtcaggtcgtggacctcgtg
gccgcccaccgctcgaccatcgtgttcgtcaactcccggcgcctggccgagcggctcacc
gcccggctcaacgagatctacgccgaggacactgaccccgggtcgctccccgagcccccc
gcccggccgcccgcgcagctcatggtgccgtcggaggtctcgcgcggggcgccgccggaa
ctggccatggcccaccacgggtcggtgtccaaggaacgccgggcgatcatcgaggacgca
ctcaaatcgggccggctccgcgcggtggtggcgacctcctcgctcgagctgggtatcgac
atgggagcggtggacctggtcgtgcaggtcgagtccccgccgtcggtggcctcggggctg
cagcgcgtgggccgcgcgggacaccaggtcggtgaggtgtcgcgggccgtggtctacccc
aagcaccgcgctgacctcgtgcacagcgcggtgacggtcgagcggatgctcgccggcgcg
atcgagggactcacggtgatcgccaacccgctcgacgtgctggcgcagcagacggtggcc
gcgtgcgcgctcgagcccatcgacgtggaggagtggttctcggccgtccggcgcacggcc
ccgtacgccgggctgccgcggtcggcgttcgaggccaccctcgacatgctcgccggcaag
tacccgtccgcggacttcgcggagctcaaaccgcggctggtgtgggaccgcgacgccggc
accctcaccggccgccccggcgcccagcggctggccgtcacctccggcggcacgatcccg
gaccgcggcctgttcggcgtgttcatggtgggggagaaggccacccgcgtcggcgaactg
gacgaggagatggtctacgagtcgcgggtcggtgacgtcttcgcgctcggggcctccagc
tggcgcgtcgaggagatcacccacgaccgcgtgctggtctctcccgcgcccggcggcacg
ggccggctgccgttctggctgggcgacgaccagggccgtcccgctgaactcggccgcgcg
ctcggcggattcctgcgcgaggtgtcggccgggtcggaggcggaggtcaccgcgcgcctg
gacgccgccggcctcgacgcctacgccgccgcaaacctccggcggtacctggccgatcag
cgcgaggcgaccggccacgtgcccagcgacacgaccttggtcgtggagcggttccgcgac
gaggtgggggactggcggatcgtgctgcactcgccgttcggcgcgcgggtgcactggccg
tgggcggaggcggtgcgcgcccggctggccgccgcgcacggcttcgacgcggtgccggtg
gtgtccgacgacggcatcatcctccgggtccccgacacgggtgacgacggcgaggggggc
gcgcgcccgggagccgagacgttcgcgatcggcgcggaggaggcggtcgatctggtgacc
cggcacgtgggcgggtcggcgctgttcgcctcacgcttccgcgagtgttccgcgcgcgcc
ctgctgttcccccgactggatccgggccgacgggccccgctgtggcagcagcgtcagaag
tccgcgcagctgctcgacgtcgcgcggagttatccggacttcccaatgatcctcgaggcg
gtgcgggagtgcctccaggacgtctacgacgtgcccgcgctcgagcgtctgctgggggag
atcgagtcgcgcagcgtgcggatcgtcgaggtggacacgcccggcgcctcgccgttcgcc
cagtcgctcctcttcgactacgtcggcgccttcctctacgagggcgactccccgctcgcc
gagaagcgggccgccgcactgagcatcgatcccggcctgctcggtcagctgctgggccga
gtcgagctgcgcgaactgctcgacgtagcggtgctcgactcgatcgaacgacgcctgcag
cacctcgagcccgagcgcgcggcgcgcgacgccgaggcggtggtcgacctgctccggctg
ctcggcccgctcaccgtcgacgagatcaccgaacggtccgccgatcccgacgccgtcccg
ggctggctcgacgagttggcccggacgtggcggatcgtcccggtggagcactccggccgc
agctggtgggccggggtcgaggacgtggcccggctccgcgacggcctcggcgtcccgccc
ccgcccggcgtgccgtcggccttcctcggcgacgtcgacgacccgctgggcgagctgatc
cgccgctacgcacgcacccacggccccttctcggtcgaggcggtcgccgagcgattcgga
ctcggcgtggcggtcgctcgcggcgtgctcgacaggctcacctcctccggcactctgctg
gccggtgagttccgccccggcgcgacggggcccgagtggtgcgacgccgaggtgctgcgc
cacatccgccgccggtcactggccgcgctgcgctcgcagatcgagccggtatcccactcc
gcgctgggccgcttcctgcccgggtggcagagcctgggctcgggtggcgccgaatccggc
gtcgacgggttgctcgcggtgatcgagcaactcgacgggctcgcgcttcccgcctccgcc
ctcgaaccgctcgtcctggcgccccgggtgagcgactactccccggcgatgctcgacgaa
ctcctggccgggggagaggtcatctggagcgggcgcggacgtgccggatcccgcgacggc
tgggtctccctgcacccggccgattccgccggcgccaccctgcccctggagcgaccgcag
ccggaggggccggtccacctcgccgtcgtcgactccctgcgcggcggagccttgttcttc
cgcgacatcgtcaccgcggtcaagaacgcactcaccgcccccaccgaccccgtccccact
gacaccgcgcccactgacaccgcgcccactgacaccgcgcccactgacaccgcgccgacc
gtcaccgagtccgcggtgcgcgacgcgctctgggacctggtgtgggacggcgtcgtcacc
aacgacacgctcgcaccgctgcgcgcggtgctcgccggcggcggctcgtcggggtcgggg
accgcgcaccggtcgccccgcgcctccgcccgcccacggcgcgcccggttcggccgcacc
gcgatggcgcagctcaacggtgctgtcgccgcggggacgaggacgccacccgtgctggcg
ggccgctggtccctcgtcccggagtcgatcaccgacgccacgctgcgggcgcacgcctgg
gccgagaccctcctgctacgccacggcgtcgtcacccggggcgcggtcgaggccgaggag
atacccggcgggttcgccgccgtgtacaaggtgctggcgcagatggaggactcgggccgc
tgtcgccgcgggtacttcgtcgacggcctcggcgccgcgcagttcgcggccggcaacacc
atcgaccgactgcgcacgttcgacgacaccgccgacgacgcccactggccctccggcacc
gacgaacccaccgtccgggtcctcgccgccaccgaccccgccaacccctacggcgccgcg
ctgccctggccgaccgccgtccccagcgctggcgccgcggcggtcgcgggcggctcgggt
caccggcccggccggaaggcgggcgctctcgtggtgctggtcgacgggatctgcgtgctg
ttcgtggaacgcggcggacgcaccgtcctcgtcttcgacgaccgcaccggtgcggtgcct
ctcgccgcgggtgcgctcgtcgacgccgtccgcgcgggagcggtcgggccgttgaccgtg
accacgctgggcggagagcccgtgcacggctcgccacacgccgccgcgttcgaggcggcg
ggcttcggcatcacgcctaaggggctccgtatccggcgctga

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