Dehalogenimonas lykanthroporepellens: Dehly_0318
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Entry
Dehly_0318 CDS
T01264
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dehly_0318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dly03019
]
Dehly_0318
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_0318
Enzymes [BR:
dly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dehly_0318
Messenger RNA biogenesis [BR:
dly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dehly_0318
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dehly_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Pribosyltran
AAA_30
AAA_22
SNF2-rel_dom
UPF0228
Motif
Other DBs
NCBI-ProteinID:
ADJ25639
LinkDB
All DBs
Position
complement(297540..299612)
Genome browser
AA seq
690 aa
AA seq
DB search
MAVYSRARALELLRVGCGKPNAKFREGQEEAIRHIVEGKGRLLVVQKTGWGKSFVYFIAV
KLLREQGHGPALLISPLLSLMRNQIQAAEKMGVKAVKIDSTNEANWTDIEESIKNNEIDI
LLISPERLENKRFNDKVLSKISDKISLIVIDEAHCISDWGHDFRPQYRLIERIIKRLPRN
LRMLATTATANNRVMDDLKQILGPHLMVSRGELTRYSLVLQTIIMPNQAERLAWLAEYVP
LLEGNGIIYTLTVRDAYRVANWLKSRGLNVEAYTSESENREKLELALLNNNLKALVSTVA
LGMGYDKPDLAFVIHYQTPGSVVAYYQQVGRAGRALKAAHGILFSGEEDTDITDYFIDSA
FPSQAEVSAILNALLEEPSGLTIDELTQTANIGYGRIKQALQLLSLESPAPVVKDGYKWQ
LTAAKINPEFWERITRLTELRKTEQRQMQDYVRLNHDHMEFLVHALDGDINQIYKPRAPK
LSEETDPNLVKDAVRFLQRTEQVIEPRLKWPVGYLPIYGLKGYIPTEFRNKPGKALCVWG
DAGWGQMVRKGKYTDSHYPDELVTACVQLYRKWNPQPAPAWVTCIPSTRHPNLVPEFAAR
LARELKLPFVQVLKKRDQRPEQKTMANSYYQALNLDGSLEIKADIIPNGPVLLVDDMVDS
RWTLTIAGWLLTTKGSGPVWPMALSVTSGK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatattcacgtgcccgggcgctggaactgctgagagtaggctgtggcaaacct
aacgctaagttcagagaaggccaggaagaagctatacgccatattgtcgagggcaagggc
cgattgttggtagttcagaaaacaggctggggtaagagttttgtatacttcatagcagtc
aagctcctgcgagaacaaggccatggcccggctctattgatctcccccttgctgtcactg
atgaggaatcagattcaagccgctgagaaaatgggggtaaaggcggtaaaaatagattca
accaatgaggctaactggactgatatcgaggaatctatcaagaataatgaaattgatatt
ctgctgatctctccggaaagactggaaaacaaacgcttcaacgataaggttttatcaaag
atttctgataaaatttctttaattgtcatcgatgaggcacattgtatctccgactggggg
catgatttcaggccgcagtaccggctcatcgaaagaataatcaaacgattaccacgtaac
ctgagaatgctggctaccaccgccacggccaataaccgggttatggacgatttgaaacag
atactggggccacatctgatggtatcaagaggtgaattaaccaggtactcactggttcta
caaacgataatcatgcccaaccaggcggaacgcctggcatggctggccgagtatgttccg
ttgttagagggaaacggtattatttatactctgacagtcagagacgcgtatcgagtagcg
aactggctgaagtccagaggattgaatgtagaagcttataccagcgaatccgaaaataga
gagaaactagagctggctttattgaataacaacttaaaagccttggtatcaacggtagct
ttgggtatgggatacgataaacccgacttggcctttgtcatccattaccagacgccgggc
tcggtagtcgcctactatcaacaagttggtcgggcgggacgagcgttaaaggccgcacac
ggtatattgttcagcggcgaagaagatacggatataacggattattttatcgacagcgct
ttcccttcacaggcagaggttagcgcgatactaaacgctttgttggaagagccaagcggt
ttaacaattgatgagttgactcagacagcaaacattggttacgggcgtataaaacaagcc
ctgcagcttttatctctggagtctccggcccctgttgttaaagacggctataaatggcaa
ctgaccgccgccaagataaatccagaattttgggaaagaataaccaggctgaccgaatta
cgtaaaacggaacaacgacaaatgcaggattatgtcagactgaaccacgaccacatggaa
ttcctggtgcatgctctggatggagacatcaaccaaatatataaaccaagagccccgaaa
ctctcagaagaaacagacccaaatctggtcaaagacgccgtcaggtttttacagcgcacg
gaacaagtcattgaaccacgcttgaaatggccggtaggctatcttccgatttacggtttg
aaaggatatattccgacagaattccgtaacaagccgggcaaagcgttgtgtgtctgggga
gacgctggttgggggcaaatggtacgtaaaggtaaatatacagattcacattatccagat
gaactggtaacggcctgcgtacaattataccggaaatggaacccgcaaccggccccggcc
tgggttacctgtattccttcaaccaggcatcctaacctggttcccgaattcgccgccaga
ttggcgagggagttgaaactaccttttgtccaagtattgaagaaaagagaccaacgtcca
gaacagaaaacgatggctaacagttattaccaggcgctgaatctggatggctctctggaa
atcaaggctgatataataccgaatgggccagtacttctggtggacgatatggttgattca
agatggactttgacgattgccggatggctattgacaacaaaaggcagtggaccggtgtgg
ccgatggcgctgtcagtaacaagtggaaagtaa
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