Dehalogenimonas lykanthroporepellens: Dehly_0407
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Entry
Dehly_0407 CDS
T01264
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dly03016
]
Dehly_0407
Enzymes [BR:
dly01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Dehly_0407
Transfer RNA biogenesis [BR:
dly03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Dehly_0407
Prokaryotic type
Methylthiotransferases
Dehly_0407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADJ25725
LinkDB
All DBs
Position
complement(383794..384996)
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AA seq
400 aa
AA seq
DB search
MTRVYLATQGCKLNQAESESLRRGLEAVGYLLTDTAKDADIMVVNTCTVTNLADRKARQS
IRSAGRVKPGIKVIVTGCYAERQAESVGALPEVAKVVAMSEKDIIPEILHELGFPPATVG
TAIATGRTRSFIKIQDGCDYRCAYCIVPTVRPRKSAVPVEKVIDEIRARRREGCREVVLT
GTEIGEYRTGNTALAGLIDAVLKETDIERLRISSLQPREITPELMACWRNPRMCRHFHLS
LQSGSDPVLRRMRRRYNTAEYAEALVAIRQVVPEAAVTSDIIAGFPGETDSEFADSLKFI
EKCGFARLHVFPFSARPGTPAAGMEGQVDRRTVRQRTDRLLALAVECEAEFRRSMSGRSF
DVLFEGKRNGQWEGYTDNYLRVSRRDSADLTNRIIPAVLD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgtatatctggccacccagggatgtaagctcaaccaggcagaatctgaatca
ttgcgacggggactggaagcagtcggatatctgttgacggatacggcgaaggacgccgat
atcatggtagtcaatacctgcaccgttaccaatctggctgaccgcaaagccaggcagtct
atcagatcagccggaagggtcaaacctggaatcaaggtcatcgtcaccggttgttatgct
gaacggcaggccgaatcggtcggtgccctgccggaggtggctaaggtagtggccatgtcg
gagaaagacatcattccggaaatactacacgagctcggtttcccgccggcaacggttgga
actgccatcgccaccgggcgtacccgctcattcatcaagatccaggacggatgcgactat
cgctgtgcctattgcatcgtcccgacggtcagaccacgcaaaagcgccgtaccggtcgag
aaagtcattgatgaaatccgggcacggcgaagagaaggctgtcgggaagtagttctgacc
ggcactgagatcggtgaataccgtaccggcaatactgccctggcgggacttatcgacgcc
gtattgaaggaaaccgatatcgaacgactgcgtatatcttcccttcagccccgagagata
acaccggaactgatggcctgctggcgtaatccccggatgtgccgtcactttcatctctca
ctgcaaagcggcagtgatccggtattgcgccgaatgcgccgccggtacaataccgccgaa
tacgctgaagcgctggtggctatccgccaggtcgttccggaagccgccgtcaccagcgat
atcatcgccggattccccggtgagaccgactctgaattcgcagacagcctgaagttcatc
gaaaaatgcggctttgcccgccttcatgtatttccattttcggcccgccccggaaccccg
gccgccggcatggaaggacaggtggaccgccggacagtacgtcaaagaaccgaccgccta
ttggcactggccgtggaatgtgaagccgagtttcgccgctcgatgtccggccggagtttt
gatgtattattcgaaggcaagcgcaacggacaatgggaaggctacaccgacaattacctg
agagtaagccgccgggattccgccgatttgaccaaccgaataataccggcggttctggac
taa
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