Dehalogenimonas lykanthroporepellens: Dehly_0534
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Entry
Dehly_0534 CDS
T01264
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dehly_0534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dly03019
]
Dehly_0534
03016 Transfer RNA biogenesis [BR:
dly03016
]
Dehly_0534
Enzymes [BR:
dly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Dehly_0534
Messenger RNA biogenesis [BR:
dly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dehly_0534
Transfer RNA biogenesis [BR:
dly03016
]
Prokaryotic type
tRNA degradation factors
Dehly_0534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
S1_RRP5
KH_PNO1_2nd
KH_2
Importin_rep_6
aRib
CsrA
Motif
Other DBs
NCBI-ProteinID:
ADJ25847
LinkDB
All DBs
Position
complement(494461..496662)
Genome browser
AA seq
733 aa
AA seq
DB search
MPEIKTFERTIGGRNLVIENGRMAGQANGAVTVRYGDTVVLVTAVIAKEPRPGVDFLPLT
IDVEERMYAAGRIPGGFIRREGRPSEQATLAARLADRPLRPLLPKSWRREIQIIVTVLTA
DQENDPDVLGVIGASCALGISEMPFDGPLSAVRVGHIDGEFVINPTHSQLENSTLDVVVA
STRSAVTMLEAGANEAPEDLMFEAIRFGHQANQEIIAIQDEIIAAVGKAKWTIEAPVVNP
ELMDKVSSIIDGKLAEAFYQADKARRQENLDKVKAELLEALNEDEYDSGDIMAAWDKKIR
QLVRSTILDKKERVSGRGIEEIRELSAEVGVLPRVHGSALFSRGQTQILNVVTLGSLQME
QKLDNISPETSKRYIHHYNFPPYSVGETKRIGTGRREIGHGALAERALLPVVPSEAEFPY
ALRLVSEAVSSNGSTSMASACASSLSLMDAGVPIKKPVAGISIGLITDDTNPDRFVTLTD
IEGLEDNYGDMDFKVAGTRDGITAIQLDMKLKGITFAVIEQTLAQARRAREVILEVMNKA
IAQSRAELSPYAPRMYKLKIDPGKIGAVIGPGGRVIRSIIEETKTTIDIEDDGTVIIGAS
DGESAKKAIAIIEGMTKDIEPDSIYTGKVSRIMSFGAFVEILPGKEGMVHISELANRRVD
KVEDVLKIGDTVTVKVIEIDSQGRINLSIRALLPPPTEEEREAMRNQPPPQGGFRRSAPG
APMDRSDRPRFRR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaaattaaaacatttgaacgcaccatcggcgggcgtaatctcgtaatcgagaac
ggcaggatggccggacaggccaacggcgccgtcaccgtccgctacggcgacaccgtggtc
ctggtgactgcggtcatcgccaaagaaccccggcccggggtggatttcctgcccctgacc
atagatgtggaagagcggatgtatgccgccggccgcatccccggcggtttcatccgccgc
gaaggccgcccgtcggaacaggccaccctggccgcccgtctggctgaccgtccgctccgg
ccccttctgcccaagagctggcgccgggaaatccagattattgtcaccgtactcaccgcc
gaccaggaaaacgatcccgatgtcctcggtgtcatcggcgcttcctgcgccctgggcatt
tcggaaatgcccttcgacggcccgctttcggcggttcgtgtcggtcacatcgacggtgag
ttcgtcatcaatcccacccattcccagctggaaaacagcacccttgacgtggttgtcgcc
agcacccgttctgccgtgaccatgctcgaagccggcgccaatgaggccccggaagacctg
atgttcgaagccatccgcttcggtcaccaggccaaccaggaaatcatcgccattcaggac
gaaatcatcgccgccgtcggcaaggccaagtggaccatcgaggccccggtagtaaacccg
gaactgatggacaaggtttcctccatcatcgacggcaagctggctgaagccttctaccag
gccgacaaagcccgccgccaggaaaacctggacaaggtcaaggccgaactgctcgaagcc
ctgaatgaagacgaatatgactccggtgatatcatggccgcctgggacaagaaaatccgc
caactggtgcgctccaccatcctggataaaaaggaacgtgtcagcggccgcggcatcgaa
gaaatccgtgagctgtccgccgaagtcggcgttctgccgcgggttcacggctccgccctg
ttctcccggggtcagacccagattctcaacgtcgttaccctcggctcgctccagatggag
cagaagctggataatatctcaccggaaacttccaagcggtacatccatcactacaacttc
ccgccctattcagtgggtgaaaccaagcgtatcggcaccggtcggcgagaaatcggccac
ggcgccctggcggagcgggccttactgcctgtcgtcccgtcagaggcggagttcccttac
gccctgcgtctggtttcggaggcggtcagctccaacggctccacttccatggccagcgcc
tgcgcttccagcctgtcgctgatggacgccggtgttcccatcaagaagccggtagccggt
atctccatcggtctgattaccgatgacaccaacccggaccgtttcgttaccctgaccgac
atcgaaggtctggaagacaactatggcgacatggatttcaaggtggccggtactcgtgac
ggcatcaccgccatccagctggacatgaagctcaagggtataacctttgccgtcatcgag
cagacgctggctcaggccaggcgcgcccgtgaggttattctggaggttatgaacaaagcc
atcgcccagagccgcgccgagctgtctccctacgccccgcggatgtacaaactgaagata
gacccgggcaagatcggcgccgtcatcggccccggcggccgggtcatccgctccatcatc
gaggagaccaaaaccaccatcgatatcgaagatgacggcaccgtcatcatcggcgcctcc
gacggcgaaagcgccaagaaagccatcgccatcatcgaaggcatgaccaaggatattgag
cctgacagcatctacaccggcaaggtaagccgcatcatgagcttcggtgccttcgtcgaa
atcctgccgggcaaggaaggcatggttcatatttcggaactggccaaccgccgggtggac
aaggtggaagatgtcctcaaaatcggcgataccgtgaccgtcaaggtcatcgaaatagat
tcccagggccgcatcaacctctccatccgggcgctactgcccccgccgaccgaggaagag
cgggaagccatgcggaatcagccgccgccccagggtggtttccggcgttcggcgccaggg
gcgcccatggaccggtccgaccgtccccgtttcaggaggtag
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