Dehalogenimonas lykanthroporepellens: Dehly_0740
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Entry
Dehly_0740 CDS
T01264
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dehly_0740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dly03021
]
Dehly_0740
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_0740
Enzymes [BR:
dly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dehly_0740
Transcription machinery [BR:
dly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dehly_0740
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dehly_0740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ADJ26046
LinkDB
All DBs
Position
complement(715508..719266)
Genome browser
AA seq
1252 aa
AA seq
DB search
MVSTLPVAGASSSAVTRKSYSRIPEVVNIPNLIDIQLASFRWLMEDGLKALVEEITPVRD
FNGNRMELEFMGYEFREPRMSEEECQHRDKDYSIPLYIKARLVIKATGEIKEPFELFFGD
LPLMTANGTFITSGTERVVVSQLLRSPGVYFKAQDDTATGRPLCQANLIPSRGAWLEFET
SNRDVISVKIDGRRKIPVTTFLRAIGYSDDNELLNLFADVDDSTDHMYIQSSIDKDPLIR
DTAGALIDLYGRLRPGDPANVDNASRLVNDMFFSPDHYDLGEVGRYKVNRRLGLDDNVGG
ENRALTREDIIAIIKRLIRVNNGREHGDDIDHLGNRRIRTVGELIQNQFRIGLVRLERVA
RERMSIVPLDQVTPSGLVNIRPVVAAVREFFGGSQLSQFMDQTNPLAELTHKRRLSAMGP
GGLSRDRAGFDVRDVHFSHYGRICPIETPEGPNIGLIGSLAAYGRVNRYGFIETPYRKVY
HELANHDLRLVGQVVIEDIVDSAGKPLLSAGSVVDDKTFKSIAKLPETSIKIEPFVSDEI
YYLAADEEDKHVIAQAHAKLDDRGRFLDERIESRFGESYLYEPPTKIEYMDISPKQIFSV
AASLIPFLEHDDANRALMGANMQRQAVPLLRPQAPLVATGMEKEAVRYSSHVIFARRDGK
VSSVTSERIVVETAGGEEDVYKLVKFMRTNQGTCINQRPVVKRGEQVKIGQVLGDSSATE
NGELALGQNLVCAFMSWHGYNYEDAIILNERLVKDDRLTSLHITRYELEARDTKLGIEEI
TRDIPNVGEESLRELDEDGIIRVGAEVGPDDILVGKITPKGETELSAEEKLLRAIFGEKA
REVKDTSLRMPHGEWGKVINVKIFSREEGDDLPARVNKWVQVWVAQKRKISVGDKLAGRH
GNKGIVSIIAPSEDMPYLPDGTPVDVILNPIGVPSRMNLGQILELHLGWAGHLMGFRVKT
PVFDGATDVDIEDDLARAAIAQMAGLIRLDYESRNTEEIIAAAKAWVNDRGYDGDKVFDD
RTVGFAREVCLRIWLEDQGVDGAAKIPMGELFEKAFQLARELNVPLPIDGKAKLRDGKTG
DYFDQPVTVGNMYILKLIHLVEDKVHARSTGPYSLISQQPLGGKAQFGGQRFGEMEVWTL
EAYGAAYNLQEMLTIKSDDVTGRAKAYESIVKGEDVSQPGVPESFKVLVKELQSLGLAVE
VINEEERLLPAEHLNEPQAEQEVSELALAGEMAVNLLGKEPEETEEEEEENE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaactttacccgttgccggagcctcatcatcggcggttacccggaagtcctat
tccagaattcccgaagtggtcaatatccccaatctcatcgacatccaactggcgtctttc
cgttggctgatggaagacggcttgaaagcactggtcgaggagattacccctgtcagggat
ttcaacggcaatcggatggaactggaattcatgggttatgaattccgtgaaccccgcatg
tcggaagaagaatgccagcaccgggacaaggactattccatccccctgtatatcaaggcg
cggttggtcatcaaggcaaccggcgaaatcaaggagcccttcgagctattcttcggcgac
ctgccgttgatgacggccaacggtaccttcatcaccagcggtaccgaacgagtggtggtc
agtcagctgttgcgctctccaggtgtttatttcaaggctcaggatgataccgccacgggg
cgcccgctttgccaggctaatctcattccatcaaggggcgcctggctggaatttgaaaca
tccaaccgtgacgtcatttccgtcaagattgatggccgacgtaagattccggttaccact
tttctcagggctatcggttacagcgacgacaacgaactgctgaaccttttcgccgatgta
gatgactctactgatcatatgtacattcagtcatctatcgacaaggacccgttgattcgg
gacaccgctggggctttgattgacctttatgggcgattgcggccaggtgacccggcgaac
gtcgataatgcttctcgtctggtcaacgatatgtttttcagccctgaccattatgacctg
ggtgaggtcgggcgttacaaggtcaatcggcgcctgggactggatgataatgttggcggt
gagaaccgtgcattgacccgggaagatatcatcgccattatcaaacgcctcatccgcgtc
aacaacggtcgggagcacggtgacgacatcgaccatctcggcaaccgccgtatccgtacg
gtgggggagcttattcagaatcagttccgcatcggactggtaaggcttgaaagagtggcc
cgtgaaagaatgagcatcgtgcctctggatcaggtgacaccctctggactggtcaatatc
cgaccggtggtggcggcggtgcgagagttcttcggcggctcgcagttgtctcaattcatg
gatcagaccaatcctctggccgagttgactcacaagcggcgtctgtcggctatgggtcct
ggcggtctgtcacgtgaccgggccggtttcgatgttcgtgacgtgcatttttctcattac
ggacggatatgtcccattgaaacgccggaaggccccaatatcggtctgatcggttctctg
gccgcctacggccgggtcaatcggtatggctttatagaaacgccttatcgcaaggtatac
cacgaactggctaatcatgacctccggctggtcgggcaggttgtgattgaggatatcgtt
gacagcgccggcaagccactgttgtccgccggatcggtggtggatgacaagactttcaag
tccattgccaagttgccggagacgtccataaaaattgaaccttttgtttccgacgaaata
tactatctggccgccgatgaagaagacaagcacgtcatagctcaggctcacgccaaactg
gatgatcgcggccgattcttggatgaacggattgaatctcgcttcggcgaaagctatctc
tacgagccgccgaccaagatcgagtacatggatatctcacccaagcagattttcagcgtg
gcggcgtctctgattccgttcctggagcatgatgatgccaaccgggctttgatgggtgcc
aatatgcagaggcaggctgtacccttgcttaggcctcaagccccactggtagccaccggc
atggagaaagaggcggttcgttacagttcccacgttattttcgcccgcagggacggcaaa
gtgtcgtcggttaccagcgagcggattgtagttgaaaccgccggaggcgaggaagacgtc
tataagctggtcaagttcatgcggaccaatcagggtacctgtatcaatcaaagaccggtg
gtaaaacgtggcgagcaggtgaagatagggcaggtgctgggtgactcttcagccaccgaa
aatggagagctggccctgggtcagaacctggtctgcgccttcatgagctggcatggttac
aactacgaagatgccattattctgaacgaacggctggtcaaggatgaccggctgacctca
ttacatataacccgctacgaactcgaagcccgggacaccaagctgggcatcgaggaaatc
acccgggatatccccaatgtcggggaggaatctctgcgggaactggacgaggacgggatc
atccgcgtcggcgccgaggtcggccccgatgacatcttggttggtaaaattacccccaag
ggtgaaaccgaactgtcggccgaagaaaagctgttacgggctatcttcggcgagaaggct
cgggaagtcaaggatacttcactgcgcatgcctcacggtgaatggggcaaggttatcaat
gtgaagattttctcgcgggaagagggggacgacctgccggcccgtgtcaataaatgggta
caggtctgggtcgcccagaagcgcaagatttcggtgggtgacaagctcgccggacgacac
ggcaataagggtatcgtgtccatcatcgctccttcggaagatatgccgtatctgcccgac
ggaacaccggttgacgtgattctcaatcccatcggtgtgccttcccgtatgaatctgggg
cagattctggagttacacctgggctgggccggacatttaatgggttttagggtcaaaaca
ccggtcttcgatggtgccaccgatgtcgatatcgaagacgacctggctcgggcggcaata
gcccagatggccgggcttatcaggctggactatgaatcccgcaataccgaagaaattatt
gccgccgcaaaggcgtgggtcaatgaccggggttatgacggcgacaaggttttcgatgac
cggacggtggggtttgcccgggaagtctgcctgcgtatatggctggaagaccagggtgta
gacggcgccgcaaaaataccgatgggtgaactgttcgaaaaggcttttcagctggctaga
gaacttaatgttcctctgccgatagacggcaaggcgaaactgcgtgacggcaagacgggc
gattactttgatcagccggtgaccgtcggcaacatgtatatactgaagcttatccatctg
gtagaggacaaggttcacgcccggtcgaccggcccttactctctcatcagccagcaaccg
ctgggcggtaaggcccagtttggcggtcagcggttcggagagatggaagtatggacactg
gaagcctatggtgccgcctataatcttcaggaaatgctgaccatcaagagtgacgatgtg
actggtcgtgccaaggcgtacgaatccatcgtcaagggcgaagatgtatcacaaccgggt
gtacctgaatcattcaaggttctggtgaaggaactgcagagcctggggctggcggtggaa
gtaattaacgaggaagagcggctgttacccgctgaacatcttaacgaacctcaggccgaa
caggaagtttccgaattggcgctggccggtgaaatggccgtcaacctgttggggaaagag
cctgaggaaaccgaggaagaggaagaagaaaacgaataa
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integrated database retrieval system
