Dehalogenimonas lykanthroporepellens: Dehly_0980
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Entry
Dehly_0980 CDS
T01264
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03410
Base excision repair
dly03430
Mismatch repair
dly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dehly_0980
03430 Mismatch repair
Dehly_0980
03440 Homologous recombination
Dehly_0980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_0980
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Dehly_0980
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dehly_0980
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Dehly_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ThiG
Motif
Other DBs
NCBI-ProteinID:
ADJ26281
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All DBs
Position
977639..979318
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AA seq
559 aa
AA seq
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MHGARWQVADGAVPEDLGRAYPGLMARVMANRGITTATEAELFLAGDARLVGDPMLLPDI
QPAMTRIYRAILGHEAVVVYGDYDTDGITATAIMVTGLKRLGANASPYIPHRLSEGYGLK
TDALKKMAAEGVSLVVSVDCGVNAVAEVKTAAKMGIDVIITDHHLPGHELPPAVAVINPK
RPDSEYPFTELSGAGVAFKVVEALFHGMGKPLPQEHFLELTALGTIADIMPLTGENRYLV
KEGLKHLNDHPSPGLTEIINLSRLRTGQLDAESISWQVAPRLNAAGRLNHAIAGYNLLTA
TSAGEAAELAAELEAQNIERQRLTLLYVNKARDRVLAEPLKSLLFIEDEECPQGILGLVA
GRLSDEFYRPSIVVRRDGELATASCRSIPGFNITAAIDRCGHLLAHYGGHAQAAGFSLKP
KDLPELAMMLGEIAERELASLDLQPVLHIDAEAMLKELGGGLFQMLQRLAPFGQGNRPPL
FVSRCVTAAGYRTIGASGDHLKMRLTQGGVVWEAIAFRQAARMLEILPDPLDIVYNLEMD
RFNGRETLRLNIVDFAPSV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgcccgctggcaggtagccgacggcgccgttccggaagacctcggccgagct
tatcccggcctgatggcccgcgtcatggccaaccgcggcataaccacggcgaccgaggct
gaactgttcctggccggagatgcccggctggtcggcgatccgatgcttctgcccgacatt
cagccggccatgacccgtatctaccgggccatactgggccacgaagctgtagtcgtttac
ggtgattacgacaccgacggcattaccgccaccgccatcatggtcaccggcctgaaaagg
ctgggggcgaatgcctccccgtatatcccccaccgcctgagcgaaggctatggtctgaaa
accgacgccttgaagaagatggccgctgaaggcgtcagtctggtggtcagcgtagattgc
ggcgtcaacgcagttgccgaggtgaagactgccgccaaaatgggaatagacgtcatcatc
accgaccatcacctgccgggacacgagctaccgccggcggtagctgtaatcaaccccaag
cggccggattccgaatatcccttcaccgaactatcgggcgccggcgtcgccttcaaagtg
gttgaggcgttgttccacggcatgggcaaaccgttgccgcaggagcatttcctggaactg
accgcgctgggcaccattgccgacatcatgccgttgacgggcgaaaaccgttacctggtc
aaagagggcttgaagcatctgaatgaccacccgtcaccgggcttgaccgaaattatcaac
ctgtcccggcttcggacaggtcaactggatgccgaaagtatctcctggcaagtggcgccg
cggctgaatgccgccggccggctcaatcacgctatcgccggttataacctgttgaccgca
acctcagccggcgaagcggcagaactggccgcggagcttgaagcccagaacatcgagcgc
cagcggttgaccttgctttatgtcaataaagcgcgggacagagtgcttgccgagccgttg
aaatccctgttattcattgaagacgaagagtgtccccagggtatcctgggcctggtggcc
gggcgtctgagcgatgaattttatcgaccatccattgtcgtccgccgtgacggtgaactg
gccaccgccagttgccgctctatccccggtttcaatatcaccgcggctattgaccgttgc
gggcacctgctggctcactatggcggccatgcgcaagcggcaggtttcagcctgaagccg
aaagacctgccggagctggccatgatgctgggcgagattgccgagcgtgaactggcatcg
ctcgacctccagccggtactgcatatcgatgccgaagcaatgctgaaggaactgggcggc
gggctgtttcagatgcttcagcggctggcccctttcggtcagggcaaccggccacccctt
ttcgtatcgagatgcgtcaccgccgccgggtatcggactatcggagcttccggcgaccat
ctcaagatgagactgacccagggaggcgtcgtctgggaagccattgccttccgccaggcc
gcccggatgctggaaatactccccgacccgctggatatcgtgtataatctggaaatggac
cgtttcaacggacgcgaaacgttacggctcaacatcgtggacttcgccccatcggtctga
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