Dehalogenimonas lykanthroporepellens: Dehly_1052
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Entry
Dehly_1052 CDS
T01264
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dehly_1052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_1052
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dehly_1052
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dehly_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADJ26353
LinkDB
All DBs
Position
complement(1046125..1048149)
Genome browser
AA seq
674 aa
AA seq
DB search
MTDFQLVSDFGLMGDQPQAVDALTRGLDEGLRDQTLLGVTGSGKTFTMANIIARTGRPAL
VISHNKTLAAQLYAEFREFFPHNSVEYFVSYYDYYQPEAYVPSRDMYIEKESDINDEIDK
LRHAATRALLSRRDVIIVASVSCIYGLGEPEEYMRFILNLEKGVSYRRDEIVRKLVDMQY
ERNDMDFTRGKFRLRGDTLELRPAYEETAIRVEFFGDEIERILRIDPLTGEFLEDIRIID
IYPAKHFVTSPEKLAKALQGIRDELAQHTAMLKEQGKLLEAARLEQRTNYDLEMLENAGY
CSGVENYSRHLALRPAGSTPWTLLDYFPEDFILFVDESHMSLPQIRGMYNGDRARKETLV
DYGFRLPSALDNRPLNFSEFRQRVGQAVYVSATPGPYEREHSAQTVEQVVRPTGLLEPII
EVKPTTGQIDDLLEQIKLRVARGERCLVTTLTKKLAEKLAEYITEAGVKTQYLHSEVETF
ERVEILRDLRLGVYDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSEWALIQTMGRAA
RHVDGRVIMYADTITGSMERAIAEVKRRREIQEAYNQEHGITPQGIRKAIKDITERVRTA
ESAVVAESDADSYKSMALSKEELARLIRELETQMKKSAKLMDFERAALLRDRIIELKREL
VEPEARPRRDTPKP
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatttccagcttgtatccgatttcggtttgatgggggaccagccccaggcggtg
gatgcgctgacccgtggtcttgatgagggcctcagggatcagacgcttctgggcgttacc
ggctccggcaaaaccttcaccatggccaatatcatcgcccgcaccgggcgtccggcgctg
gtcatttcccataacaaaacgctggccgcccagctttacgccgaattccgggagtttttc
ccgcataattccgtagagtactttgtcagctattatgactattaccagccggaagcctat
gtcccttcccgggacatgtatatcgaaaaggaatcggatatcaatgatgagatagacaaa
ctgcgtcatgccgccaccagggcgttattgtcgcgccgggatgtcatcatcgtcgcttcg
gtttcctgtatctacggcctgggtgagccggaagaatacatgcgcttcatcctcaatctg
gaaaagggagtcagttatcgccgggatgaaatcgtccgcaaactggtggatatgcagtat
gaacgcaatgacatggatttcacccggggcaagttccggcttcgcggcgacactctcgaa
ttgcgtcccgcctatgaggaaacggctatccgggtggagttcttcggtgatgagatagaa
cgtatcctgcgtatcgacccgctcaccggagagtttctggaagacatcaggataatcgac
atctatcccgccaagcatttcgttacttcgccggagaagctggccaaagccctccagggc
atccgggatgaactggctcagcacaccgccatgctcaaggagcagggcaaactgctggaa
gccgcccggctggaacaacgcaccaactatgacctggagatgctggagaacgcgggttac
tgctccggggtggagaattattcacggcacttggcactcaggccggccggctccacgccg
tggaccctcctggattacttcccggaagatttcatcctcttcgtcgatgaatcgcacatg
tccctgccccagatacgcggcatgtacaacggcgaccgggcgcgcaaggaaaccctggtg
gattacgggttccgcctgccttccgctttggacaaccggcccctgaacttttcggagttc
cgacagcgggtgggtcaggccgtatatgtttcggccacgccggggccttacgagagggaa
cattcggcgcagacagtggagcaggtggtgcggcctaccggtctgctggaaccgattatc
gaggtcaagccgaccaccgggcagatcgatgacctgctggagcagataaaactgcgggtg
gcacgcggtgaacgctgtctggtaaccacacttaccaagaaactggcggagaaactggca
gaatacatcaccgaagccggggtcaagacccagtacctccattcagaggtggaaaccttt
gaacgggtagagatactgcgtgacctgcgcctgggcgtttatgatgttatcgtcggtatc
aatctcctgcgggaaggtctggacctgccggaggtgtcgctggtggccattctggatgcc
gacaaggaaggcttcctgcgttcggagtgggcgcttattcagaccatgggccgcgccgcc
cgtcatgtggacggccgggtcatcatgtatgccgataccatcaccggaagcatggagcgg
gctatcgctgaggtcaaacgccgccgggagatacaggaagcctataatcaggaacacggc
atcacgccgcagggtatccgcaaggcgattaaagatattaccgaaagagtacggacggcg
gaaagcgcggtggtagcggagtcagacgccgatagctataaatccatggcgttgagtaaa
gaggaactggcgcggctcatcagggaactggaaacgcagatgaagaaatcagccaagctg
atggacttcgagcgggcggcgttactgcgcgaccgtatcatcgaactgaaacgggaactg
gtggagccggaagcccggccccggcgtgatacgcctaaaccgtaa
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