Dehalogenimonas lykanthroporepellens: Dehly_1167
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Entry
Dehly_1167 CDS
T01264
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dehly_1167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dly03019
]
Dehly_1167
Enzymes [BR:
dly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dehly_1167
Messenger RNA biogenesis [BR:
dly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dehly_1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
P-loop_SecA
AAA_22
TerL_ATPase
HicA_toxin
Motif
Other DBs
NCBI-ProteinID:
ADJ26461
LinkDB
All DBs
Position
complement(1146611..1147900)
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AA seq
429 aa
AA seq
DB search
MTFENFDLHPAVRDGVKSAGYTEPTPIQAQAIPPALQGRDLIGLAQTGTGKTTAFVLPML
QRLLRGPRGKLRGLIVSPTRELAEQIYDSVKTLSQHTGLRAMAIYGGVGMEPQKAKLRAG
TDIVIACPGRLLDHVWQGTIDFDDVEMLVIDEADRMFDMGFLPDIRKILRCLVRPERQTL
LFSATMPADVRKLVQEFLTDPVTVQIGTVAPAVTVTHALYPVRQDLKTALLKQILRQIED
AGSVLVFTRTKHRTERVAIALRQAGYAVASIQGNLSQYRRQAALDGFKDGTFKVLVATDI
ASRGIDVSDVSHVINYDMPDTADAYIHRIGRTGRIGRSGDAFTFVTPEDESMVRALEKLL
KTTIERRTVEGFDYNAPEPPPSRFSGAPGRGNRPAPKPRQAALDPAEEAPPRKKRRRPPR
RRPAAPPQA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgaaaacttcgacctccatcccgccgtcagggacggggtgaaatccgccggc
tacaccgagcccacccccatccaggcccaggccatcccgcccgccctccaggggcgtgac
ctcatcggtctggcccagaccggcaccggcaagaccactgccttcgttctgcccatgctc
cagcgcctgctccgcggcccccgcggcaaactgcgcggcctcatcgtttcgcccacccgt
gaactggcggaacagatttacgacagcgtcaagaccctctcacagcacaccggactgcgt
gccatggccatctacggcggcgtcggtatggaaccacagaaggccaaactccgggccggc
accgacatcgtcatcgcttgccccggtcgcctgctggatcacgtctggcagggcaccatc
gactttgatgacgtcgaaatgctggtcatcgacgaagctgaccgcatgttcgacatgggc
tttctgcccgatatccgcaagattctccggtgcctggtgcggccggaacgtcagaccctt
cttttttcggccaccatgccggcggacgttcgcaagctggttcaggaattcctgaccgac
ccggtcaccgtccagatcggcaccgtggccccggcggttaccgtcactcacgccctctac
ccggtgcgtcaggatctcaagacggcattgctgaagcagatactgcggcagatagaagac
gccggttccgtattggtattcacccgcaccaagcaccgcacggagcgggtggccatcgcc
ctgcgacaggctggctacgccgtggcctccatccagggcaacctgtcgcaataccgccgg
caggcggcacttgacggcttcaaggacggcaccttcaaggtgctggtagccaccgatatc
gcctcacgcggtatcgacgtttccgatgtttcccacgtcatcaactacgatatgcccgat
accgccgacgcctacatccaccgcatcggcagaaccggccgcatcggcagatccggcgat
gccttcacctttgtcacccccgaggacgaatccatggtgcgcgccctggagaaactgctc
aaaaccactatcgaacggcgcaccgtcgagggcttcgattacaacgccccggagccgccg
ccgtcccgcttctccggcgcgcccggccgcggcaaccggcctgcccccaaaccccggcag
gccgccctggacccggctgaagaggcacctccccgcaagaagcgacgccgcccgccgcgg
cgcagacccgccgcgccgccgcaggcctga
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