Solidesulfovibrio magneticus: DMR_00040
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Entry
DMR_00040 CDS
T00917
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dma
Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dma03032
]
DMR_00040 (gyrA)
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_00040 (gyrA)
Enzymes [BR:
dma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DMR_00040 (gyrA)
DNA replication proteins [BR:
dma03032
]
Prokaryotic type
DNA Topoisomerases
DMR_00040 (gyrA)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DMR_00040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAH73495
UniProt:
C4XT13
LinkDB
All DBs
Position
5459..7900
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AA seq
813 aa
AA seq
DB search
MSDLIQIEEELKKSYLEYSLSVIIGRAIPDVRDGLKPVHRRILYAMHDLSNTYNRPYKKS
ARVVGDVIGKYHPHGDQSVYDALVRMAQDFSMRDAIVDGQGNFGSIDGDAAAAMRYTEVR
MSRLAGEFLADIEKETVDFRPNYDNSLEEPAVLPTKVPNLLLNGSSGIAVGMATNIPPHN
LGELCDGLLHLLDTPSCPVTDIIGLVKGPDFPTGAAIYGGKGLTEAYTTGRGTIKIRGRA
EVEERKKDYVSVVIREIPYALNKSSLVEKIAALINDGRIEGVSDLRDESDRKGIRIVLDL
KKGVIPDIVINALYKYTPLETSFGINMLVVADNRPALLNIKQVLEHFLTHRRDVILRRTR
FDLRKSEERAHILEGLRIALDNIDEVVSIIRASKNAVEARERLMERFGLSERQAQAILDM
RLQRLTNLERQKLIDEYNELIKLIEYLRSILENDEVLRGVIRDEIKEIQDRYATPRKTEI
LEDLEGINILDLIPDEDVVITLSRRGYIKRTKIDNYQQQKRGGKGIAGVATAGDDFVQSF
CATTNHQQLLLFTNLGRMFMLPVHQIPEGQRTAKGAHIANLLPMDKEEFVATALSIREFS
EERYFLFVTRKGMVKRTCTDLYKNCRSTGIIAVGLKENDELLTVKEIDDETEVLLATQQG
LSNRFHISGVRPTGRGAAGVKGIALKGNDRVAAGVVITSVSRSEVLTVSANGYGKRTSIE
HYPIRNRGGSGVINMRVTPKTGQVIGAVMVGDDDELLLLTSANKIIRLSVSGISSVGRAT
QGVMLVRMDENDTVMGFDLVDPSDLDRCAPSGE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgatccaaatcgaggaagagctcaagaagtcctatctggaatattccttg
agcgtcatcataggccgcgccatccccgatgtgcgcgacggcctcaaacccgtgcaccgg
cgcattctctacgccatgcacgatctgtccaacacctacaaccggccctacaagaaatcc
gcccgcgtcgtcggtgacgtcatcggtaaataccatccccacggcgaccaatccgtgtac
gacgccctggtccgcatggcccaggacttctccatgcgcgacgccatcgtggatggccag
ggcaacttcggctccatcgacggcgacgccgcggcggccatgcgatacaccgaagtccgc
atgtcccgcctggccggcgagttcttggccgacatcgaaaaggaaaccgtcgattttcgg
cccaactacgacaacagcctggaagagccggccgtcctgcccaccaaggtgcccaatctg
cttttaaacggctcctcgggcatcgccgtcggcatggccaccaacatcccgccccacaac
ctgggcgagctgtgcgacggcctgctgcacctgctcgacacgccctcctgcccggtcacc
gacatcatcggcctggtcaaggggccggacttccccaccggcgcggccatctacggcggc
aagggactcaccgaagcctacaccaccggacgcggcaccatcaaaatccggggccgggcc
gaggtcgaggaacgcaagaaagattatgtttccgtggtcatccgggaaatcccgtatgcg
ctcaacaagtcttccctggtggaaaagatcgcggcgctcattaacgacggccgcatcgag
ggcgtgtccgacctgcgcgacgagtccgaccgcaagggcatccgcattgtcctggatctc
aaaaagggcgtcatccccgacatcgtcatcaacgccctgtacaagtacacgccgctggaa
acctcgttcggcatcaacatgcttgtggttgccgacaaccggccggcgcttttaaacatc
aagcaggtcctggagcacttcctcacccaccgccgcgacgtcatcctgcgccgcacccgg
ttcgatctgcgaaagagcgaggagcgcgcccacatcctcgaaggcctgcgcatcgccctg
gacaacatcgacgaagtggtctccatcatccgggcctccaaaaacgccgtcgaagcccgg
gaacggttgatggagcgcttcggcctgtccgagcgccaggcccaggccatcctggacatg
cgccttcaacgcctgaccaacctggagcgccaaaagctcatcgacgagtacaacgagctc
atcaagctcattgaatacctgcgctcgatcctggaaaacgacgaggtgctgcgcggcgtc
atccgcgacgaaatcaaggaaatccaggaccgttacgccaccccgcgcaagactgagatt
ctggaggaccttgaaggcatcaacatcctcgatctcatccccgacgaggacgtggtcatc
accctgtcgcgccggggctacatcaagcgcaccaaaatcgataattaccagcaacaaaag
cgcggcggcaaaggcatcgccggggtggccacggccggcgacgactttgtccagtcgttt
tgcgccaccaccaaccaccagcagttgttgctttttaccaacctcggccgcatgttcatg
ctgcccgtgcaccagattcccgaaggccagcgcacggccaagggcgcgcacatcgccaac
ctgctgcccatggacaaggaagagttcgtggccacggccctgtccatccgcgagttctcc
gaggagcgctatttcctgttcgtgacccgcaagggcatggtcaagcgcacctgcaccgac
ctctacaagaactgccgttccacgggcatcatcgccgtggggcttaaggaaaacgacgaa
ctcctgaccgtcaaggagatcgacgacgagaccgaagtcttgctggccacccagcagggc
ctgtccaaccgcttccacatcagcggcgtgcgccccaccggccggggcgcggccggcgtc
aagggcattgcccttaagggcaacgaccgtgtggccgccggcgtggtcatcaccagcgtc
agccgctccgaggtgctcactgtctcagccaacggctacggcaagcgcacctccatcgaa
cactaccctatccgcaaccggggcggctccggcgtcatcaacatgcgcgtgacgcccaag
accggtcaggtcatcggcgcggtcatggtcggcgacgacgacgaactgctgctgttaacc
tccgccaacaagatcatccgcctgtccgtctccggcatctcgtccgtgggccgggccacc
cagggcgtcatgctggtgcgcatggacgaaaacgataccgtcatgggctttgacctggtc
gatccgagcgacctcgaccggtgcgcgccctccggcgaatag
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