Solidesulfovibrio magneticus: DMR_05260
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Entry
DMR_05260 CDS
T00917
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma00260
Glycine, serine and threonine metabolism
dma00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dma01100
Metabolic pathways
dma01110
Biosynthesis of secondary metabolites
dma01230
Biosynthesis of amino acids
Module
dma_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DMR_05260 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DMR_05260 (trpB)
Enzymes [BR:
dma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
DMR_05260 (trpB)
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GFIT
Motif
Pfam:
PALP
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
BAH74017
UniProt:
C4XI55
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All DBs
Position
complement(588322..589515)
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AA seq
397 aa
AA seq
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MTMHKKGYYGDFGGQFVPELLMPPLLELEEAMRTIVPSEPFKKELNALLADYVGRPSPLY
RCPNLSKELGFDLWLKREDLNHTGAHKINNTMGQGLLTKYMGKTALLAETGAGQHGVATA
TAAAMLGLDCIVYMGAEDVVRQAHNVKRMKLLGAEVVPIESGTKTLKDAINAALRYWIAE
QATTHYCFGTAAGPHPFPLLVREFQAVISLEARAQCLDKMGRLPDYVVACVGGGSNAIGM
FHHFVPDETVKLIGVEAGGTGEPGCYHSAPISLGTPGVLHGMRTMLLQTSEGQIEPSHSV
SAGLDYPGVGPEHAHYGASGRVRYDIAVDDQALAAFEALCRREGIIPALESCHAVAWVLN
HAAEIPKGSQVVVCLSGRGDKDLGIIEAHEAKLGGAK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcataaaaaaggctactacggcgactttggcgggcagttcgtgccggagctg
ctcatgccgccgctgttggaactggaagaggccatgcgcaccatcgtgcccagcgagccg
ttcaagaaggagctcaatgcgctgctggccgattacgtgggccggccgtcgccgctgtat
cgctgtcccaacctgtccaaggaactgggctttgatttgtggctcaagcgcgaggatttg
aaccacaccggcgcgcacaagatcaacaacaccatgggccaggggcttttgaccaagtac
atgggcaagacggcgcttttggccgagaccggggccggccagcacggcgtggccacggcc
acggccgccgccatgttgggcctggactgcatcgtctatatgggagccgaggacgtggtg
cgccaggcgcacaacgtcaagcgcatgaagctgctgggggccgaggtcgtgcccatcgag
tccggcaccaagaccctcaaggacgccatcaacgcggccctgcgctattggatcgccgag
caggccacgacgcattactgtttcggcacggccgccggaccgcatccgtttcccctgctc
gtgcgcgagttccaggccgtcatttccctggaagcccgcgcccagtgcctggacaagatg
ggccggctgccggactacgtggtggcctgcgtgggcggcggctccaacgccatcggcatg
ttccaccatttcgtgcccgacgaaacggtcaagctcatcggcgtcgaggccggcggcacg
ggcgagccgggctgctaccacagcgcgcccataagccttggcacgcccggggtgctccac
ggcatgcgcaccatgctgctgcaaaccagcgaaggccagatcgaaccgtcccattccgtg
tcggccggcctggattatcccggcgtcggcccggagcacgcccactacggggccagcggc
cgggtgcgctacgacatcgccgtggacgatcaggccctggccgccttcgaggcgctgtgc
cgccgcgagggcatcatcccggccctggagagctgccatgccgtggcctgggtcctcaat
cacgccgccgagatacccaaaggttcccaagtcgtcgtctgtttgtcgggacgcggcgac
aaggacctcggcatcatcgaggcccacgaagccaagcttggaggcgcgaaatga
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