Solidesulfovibrio magneticus: DMR_07030
Help
Entry
DMR_07030 CDS
T00917
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03420
Nucleotide excision repair
dma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMR_07030
03430 Mismatch repair
DMR_07030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_07030
Enzymes [BR:
dma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DMR_07030
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMR_07030
MMR (mismatch excision repair)
Other MMR factors
DMR_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
HHH_5
PcrA_UvrD_tudor
DEAD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BAH74194
UniProt:
C4XJ30
LinkDB
All DBs
Position
complement(786292..788511)
Genome browser
AA seq
739 aa
AA seq
DB search
MDCTNELNPAQLEAVSTTEGPVLVIAGAGSGKTRTIVYRLAHLVLKGVEPASILLLTFTR
KAAQEMLTRAGLLLALGAQGISGVAGGTFHAFAFAALRRYSEAAGFPGGFTCLDAADCED
ILGQCKDRLGLGKGDRSFPRKSAILGLLSKARNKELEVGDVIAREAFHLLPYAEAITSLG
QAYGAFKAEHNLLDYDDLLFTLERLLADPAGPGALIRARHSHVMVDEYQDTNKVQARLTR
LLAPEGGNVMAVGDDAQSIYAFRGASVDNILDFPSLFPGTKLIKLERNYRSTQPILNLTN
AVLAGAGRKFEKHLFTTREDGPQPQCMRPFSDLTQASMVAAKVKELSATFPLHEIAVLFR
AGYQSYALEVELGKAGIPFQKYGGQKFSEAAHIKDVLAYLRLARNTADFPAWSRVLAFVP
GIGPKTATRIFEAIRAGDRAMLGKMAAKSGEFKALIEFLDALRALPPSPQELLSKVIEAY
APLLTERYPDDYPRRQAGLDQLEQIAAAYADLDAFLADLVLENPDEDRKKAREGHLVLST
VHSSKGLEWSAVLIIDLVDERFPSRHALSRAEDLEEERRLLYVACTRARDYLGLFSPETL
YQRQGGGCAPAMPSIFLRELPQGLLAERRERLGGSGAASFACPAPTAASSSAQSFTRQPM
RRATSAPLSARLPAREDAPAPRPAPDPSTLGYCRHKIFGRGKVIGVLDDGKYRVNFPNFG
PKVILAAFLEMEGAASPEA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggactgcacaaacgaactgaaccccgcccagcttgaggccgtcagcaccaccgaaggg
ccggtcctggtcatcgccggcgccggcagcggcaagacccgcaccattgtctaccgtctg
gcccatctggtgctcaagggcgtggagccggcctccatcctgcttttgacctttacccgc
aaggccgcccaggagatgctgacccgggccgggctgctcttggcccttggggcccaaggc
atctcgggcgtggccggcggcaccttccacgcctttgcctttgccgcgctgcgccgctac
agcgaggccgccggttttcccggcggcttcacctgcctcgacgccgccgactgcgaggac
atcctcggccagtgcaaggaccggctgggcctgggcaagggcgaccggtcgtttccccgc
aaatcggccatcctgggcctgctctccaaggcccgcaacaaggagttggaagtcggcgac
gtcatcgcccgggaagcctttcacctgctgccctacgccgaggccatcacgagccttgga
caggcctacggcgcgttcaaggccgagcacaatctcctcgactacgacgacctgctcttc
accctggagcggctcctggccgaccccgccggccccggcgcgctcattcgcgcccgtcac
agccatgtcatggtcgatgagtatcaggacaccaacaaggtccaggccaggcttacgcgc
cttcttgccccggaaggcggcaacgtcatggccgtgggcgacgatgcccaatccatctac
gcctttcgcggcgcgtcggtggacaacatcctggatttcccgagcctgttcccgggcacc
aagctcatcaagctggaacgcaactaccgctccacccagcccattttgaatctcaccaac
gccgtgctggccggagccggacgcaagttcgaaaaacatctcttcaccacccgcgaggac
ggcccccagccccagtgcatgcggcccttttccgacctcacccaggcgtccatggtggcg
gccaaggtcaaggaactctcggccaccttcccgctgcatgagatcgccgtgctgtttagg
gccggctaccagtcctacgccctggaagtggagctcggcaaagccggcatccccttccag
aagtacggcggccagaaattctccgaagccgctcacatcaaggacgtgctggcctacctg
cgtctggcccgcaacacggccgactttccggcctggtcccgggtgctggccttcgtgccg
ggcatcggccccaaaacggccaccaggatcttcgaggccatccgggccggcgaccgggcg
atgctcggcaagatggcggccaaatcgggcgaattcaaggcgctgatcgaatttctcgac
gccctgcgcgccctgccgccctcgccccaggagctgctctccaaggtcattgaggcctat
gccccgcttttgaccgaaagataccccgacgactatccgcgccgccaggccggcctagac
cagctcgaacagatcgccgccgcctacgccgacctcgacgccttcctggccgaccttgtc
ctggaaaacccggacgaggaccgcaaaaaggcccgcgaaggccatctggtgctgtccacg
gtccactcctccaagggcctggaatggtcggccgtgctcattatcgatctggtggacgaa
cgtttcccctcgcgccacgccctgtcccgggccgaggacctggaagaggaacgccggctg
ctctacgtggcctgcacccgcgcccgggactatctcgggcttttttccccggagacgctt
taccagcgccagggaggcggctgcgccccagccatgccgagcatttttctgcgcgaactg
ccccagggcttgctggccgagcgccgcgaacgcctggggggctccggcgcggccagcttt
gcctgccccgcgcccacggccgccagttcctccgcccaatccttcacgcgccagcccatg
cgccgggccacctcggccccgctctcggcccggctgccggcccgggaggacgccccggcc
ccgcgcccggccccggacccgtcgacgctgggctattgccgccacaagattttcgggcgc
ggcaaggtcatcggcgtcctggacgacggcaaataccgggtcaattttcccaatttcggc
cccaaggtgatcctggccgcctttttggaaatggagggcgccgcctcccccgaggcctga
DBGET
integrated database retrieval system
