Solidesulfovibrio magneticus: DMR_12460
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Entry
DMR_12460 CDS
T00917
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DMR_12460 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dma03021
]
DMR_12460 (rpoA)
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_12460 (rpoA)
Enzymes [BR:
dma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DMR_12460 (rpoA)
Transcription machinery [BR:
dma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DMR_12460 (rpoA)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DMR_12460 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
BAH74737
UniProt:
C4XLK3
LinkDB
All DBs
Position
1353337..1354380
Genome browser
AA seq
347 aa
AA seq
DB search
MLTRNGQRLINSRNWTELVKPEVLDKDPSSTETFGRFVCEPLERGFGTTLGNALRRVLLS
SLQGAAIVAARIEGVQHEFSTIPGVIEDVTEIILNLKQVRLAMATDEPQRLTLLAKEKGE
VRASAIQGNHNVSVLSEDVLIATLSEDRDFRIDLEVRMGKGYVPADMHEGLESEIGLILL
DASFSPVKKVAYTIEQARVGQMTNYDKLVLEVTTDGSIAPEDAISYSAKILKDQLTVFIN
FDEKESEAEKNRRRDDIELNPSLFKSIDELELSVRATNCLKSANIQTVGELMQKTEHEML
KTKNFGKKSFEEIRRVLEDMGLEFGMRIENFDQKYQEWLKRKQTDEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttgactcgtaacggccaaaggctcatcaactcccgcaactggaccgaactcgtcaag
cccgaagtcctggacaaggacccgagctccaccgagaccttcggacggttcgtgtgcgag
cccctggaacgcgggttcggcacgacgctcggcaatgccctgcgtcgcgtgctcctgtcg
tccctgcagggcgcggccatcgtcgccgcccgcatcgaaggggtgcagcacgaattctcc
acgattccgggagtcattgaggatgtcaccgagatcatcctcaatctcaagcaggtgcgg
ctggccatggccaccgacgagccccagcggctcaccctgctcgccaaggaaaagggcgaa
gttcgggccagcgccattcagggcaatcacaacgtctcggtgctgtccgaggacgtcttg
atcgccaccctttccgaagaccgcgatttccgcatcgacctcgaagtgcgcatgggcaag
ggctatgtcccggccgacatgcacgaagggctcgaatccgaaatcggcctgatcctcctg
gatgcgagcttctcgccggtgaagaaggtggcctacaccatcgaacaggcccgcgtcggc
cagatgaccaactacgacaagctcgtgttggaagtcaccaccgacggctccatcgcccct
gaggacgccatttcctacagcgccaagatcctcaaggatcaactcacggttttcatcaat
ttcgacgagaaggaatccgaggcggagaagaatcggcgtcgtgacgacatcgagctcaac
cccagcctgtttaaaagcatcgacgaacttgagctctccgtgcgcgccaccaactgcctg
aagtccgccaacatccagaccgttggcgagctcatgcagaaaaccgaacacgagatgctc
aagaccaagaacttcggcaagaaatcctttgaggaaatccgccgcgttctcgaggatatg
ggtctcgaattcggtatgcgcatcgagaacttcgaccaaaaataccaggaatggctcaag
aggaagcagaccgatgaggcataa
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