Entry |
|
Symbol |
uvrA
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
dma Solidesulfovibrio magneticus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dma00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMR_16810 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:dma03400]
DMR_16810 (uvrA)
DNA repair and recombination proteins [BR:dma03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMR_16810 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DMR_16810 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1874514..1877273)
|
AA seq |
919 aa
MMDETPRIRIEGARQHNLKNLTLDIPRDKLVVVCGPSGSGKSTLAFDIVYAEGQRRYVES
LSAYARQFLPQMDKPQVDKIEGLSPAISLEQQTATRNPRSTVGTVTEIYDFLRVFFARLG
KPHCPKCGEAITARTADEIIGDILALPEGSKLLLLAPLVEHQKGTHADRLKKLKSQGFAR
VRVAGQIVPLEPLPELEKNKRHNIDLVVDRLVVKDGIRSRLSDSVELALAQGDGRIYIAD
HEGKAKDRIFSTASSCPTCKISVPRPSPQLFSFNSPQGACPACSGIGAVEYFEPALLAPN
KGLSLAEGAILPWKSERALARYSKQLENLGARHGFTLATKLADFTPEALQALYYGDAAFG
WAGVVSLLEKGQSFGPVWHDELARYRQSRPCPVCGGARLRPEALAVRVAEASIADFCAMP
IDRALPWLAGLDFTGAEAVIAEPLLKELNHRLKFLSGVGLEYLSLSRNMATLSGGEAQRI
RLAGQLGSGLVGVTYVLDEPSIGLHPRDNDRLLATLRQLQGRGNTVLVVEHDEATIKSAD
HVIELGPGSGRLGGEIVYQGDVAGMLASPTSLTGKYLRGEAASPRPESRRPPKGELVLRG
VTTNNLKNIDATIPLGCLVCVTGVSGSGKSSLVMDTLYKHLALSKGIKVDAPGAIAGIEG
AGLIEKIVSIDQTPIGRTPRSNPATYTKVFDEIRDIFTTTPDAKRRGFKPGRFSFNVKGG
RCEACGGDGQIRVEMHFLPDIYVTCEVCGGLRYNRETLDVRYKGLNIAEVLDLTVRQARE
FFENYPVLDRRLEVLEEVGLEYLHLGQPATTLSGGEAQRIKISRELGKRSLPGALYILDE
PTTGLHMQEVGKLITVLHRLVDKGASVVVIEHNTDVVAASDHVIDLGPGGGEGGGRIVAK
GTPEELKADPNSVTGRFLP |
NT seq |
2760 nt +upstreamnt +downstreamnt
atgatggacgagactccccggattcgcatcgaaggcgcgcgccagcacaatctcaaaaac
ctcaccctggacattccccgggacaagctcgtggtggtctgcggcccgtcgggatcgggc
aagtccaccctggccttcgacatcgtctacgccgagggccagcggcgctacgtggaatcg
ctgtccgcctacgcccggcagttcctgccccagatggacaagccgcaggtggacaagatc
gagggcctgtccccggccatctccctggagcagcaaacggccacgcgcaacccccgctcc
acggtgggcacggtgacggaaatctacgatttcctgcgcgtgtttttcgcccgcctgggc
aagccccactgccccaaatgcggcgaggccatcaccgcccgcaccgccgacgagatcatc
ggtgacatcctggccctgcccgaaggctccaagctgctgcttttggccccgctggtggag
catcaaaaggggacccacgccgacaggctcaaaaagctcaagagccagggctttgcccgg
gtacgcgtggctggccagatcgtgcccctggagccgttgccggaactggaaaaaaacaag
cgccacaacatcgatctggtggtggaccggctggtggtcaaggacggcatccgctcgcgc
ctgtcggattcggtggagctggccctggcccagggcgacggccgcatctacatcgccgac
catgagggcaaggccaaggaccgcatcttctccacggcctcgtcctgccccacctgcaaa
atcagcgtgccgcgcccctcgccccagctcttttcctttaatagcccccagggggcctgc
ccagcctgttcgggcatcggcgcggtggaatacttcgaaccggcgcttctcgcccccaac
aagggcctgtccctggccgaaggggccatcctgccctggaagagcgaacgggccctggcc
cgctacagcaagcagctggaaaacctgggcgcgcgccacggcttcaccctggccaccaag
ctggccgatttcacccccgaggcgctccaggcgctgtattacggcgacgccgcctttggc
tgggccggggtggtgagtctgctcgaaaagggccagtccttcggcccggtctggcatgac
gagctggcccgctaccgccagtcgcggccgtgtccggtctgcggcggggcgcggctgcgc
ccggaagccctggccgtgcgcgtggccgaggccagcatcgccgatttttgcgccatgccc
atcgaccgcgccctgccctggctggccggcctggactttaccggggccgaggcggtcatc
gccgagccgcttttaaaggaactcaaccaccgcttgaagtttctctcgggcgtggggctg
gagtatctttcgctgtcgcgcaacatggccacgctgtccggcggcgaggcccagcgcatc
cgcctggccggacagctcggctcgggcctggtcggcgtcacctatgtcctggacgagccg
agcatcggcctgcacccccgggacaacgaccggctgctggcgaccctgcgccagctccag
ggccggggcaacaccgtgctcgtggtcgagcacgacgaagccaccatcaaaagcgccgac
cacgtcatcgagctgggtcccggctcgggccggcttggcggcgagatcgtctaccagggc
gacgtggccggcatgctcgcctcgcccacatcgcttaccggcaaatatctgcggggcgag
gccgcctcgccccgccccgaatcgcgccgtccgcccaaaggcgaacttgtgctgcgcggc
gtgaccaccaacaacttgaaaaacatcgacgcgaccattccgctggggtgtctcgtgtgc
gtcacgggcgtgtccggctcgggcaagtcgtccctggtcatggatacgctgtacaagcac
ctggccttgtccaagggcatcaaggtggatgcgcccggggccatcgccggcatcgaggga
gcgggacttatcgaaaagatcgtcagcatcgaccagacgcccatcggccgcaccccgcgc
tccaacccggccacctacaccaaggtgtttgatgagatccgcgacatcttcaccaccacc
cccgacgccaaacggcgcggcttcaagcccgggcgcttcagcttcaacgtcaagggcggg
cgctgcgaggcctgcggcggcgacgggcagatccgggtggagatgcactttctgcccgac
atctacgtcacctgcgaggtctgcggcgggctgcgctacaaccgcgagaccctggatgtg
cgctacaagggcttaaacatcgccgaggtgctggacctcaccgtgcgccaagcccgggag
tttttcgaaaactatccggtgctggaccggcgtctggaagtcctggaggaagtgggcctg
gagtacctgcacctgggccagccggccacgacgctgtccggcggcgaggcccagcgcatc
aagatctcgcgggagctgggcaagcggagcctgcccggggcgctctacatcctggacgaa
ccgaccacgggcctgcacatgcaggaggtgggcaagctcatcaccgtgctgcaccggctg
gtggacaagggagccagcgtggtggtcatcgagcacaacaccgacgtggtggcggcctcg
gaccacgtcatcgacctcggcccgggcggcggcgagggcggcgggcgcatcgtggccaag
ggcacgcctgaggaactcaaagccgacccgaattcggtgaccgggcgttttctgccgtaa |